Evolution and epidemic spread of SARS-CoV-2 in Brazil.
Identifieur interne : 000F84 ( Main/Exploration ); précédent : 000F83; suivant : 000F85Evolution and epidemic spread of SARS-CoV-2 in Brazil.
Auteurs : Darlan S. Candido [Royaume-Uni, Brésil] ; Ingra M. Claro [Brésil] ; Jaqueline G. De Jesus [Brésil] ; William M. Souza [Brésil] ; Filipe R R. Moreira [Brésil] ; Simon Dellicour [Belgique] ; Thomas A. Mellan [Royaume-Uni] ; Louis Du Plessis [Royaume-Uni] ; Rafael H M. Pereira [Brésil] ; Flavia C S. Sales [Brésil] ; Erika R. Manuli [Brésil] ; Julien Thézé [France] ; Luiz Almeida [Brésil] ; Mariane T. Menezes [Brésil] ; Carolina M. Voloch [Brésil] ; Marcilio J. Fumagalli [Brésil] ; Thaís M. Coletti [Brésil] ; Camila A M. Da Silva [Brésil] ; Mariana S. Ramundo [Brésil] ; Mariene R. Amorim [Brésil] ; Henrique H. Hoeltgebaum [Royaume-Uni] ; Swapnil Mishra [Royaume-Uni] ; Mandev S. Gill [Belgique] ; Luiz M. Carvalho [Brésil] ; Lewis F. Buss [Brésil] ; Carlos A. Prete [Brésil] ; Jordan Ashworth [Royaume-Uni] ; Helder I. Nakaya [Brésil] ; Pedro S. Peixoto [Brésil] ; Oliver J. Brady [Royaume-Uni] ; Samuel M. Nicholls [Royaume-Uni] ; Amilcar Tanuri [Brésil] ; Átila D. Rossi [Brésil] ; Carlos K V. Braga [Brésil] ; Alexandra L. Gerber [Brésil] ; Ana Paula De C Guimarães [Brésil] ; Nelson Gaburo [Brésil] ; Cecila Salete Alencar [Brésil] ; Alessandro C S. Ferreira [Brésil] ; Cristiano X. Lima [Brésil] ; José Eduardo Levi [Brésil] ; Celso Granato [Brésil] ; Giulia M. Ferreira [Brésil] ; Ronaldo S. Francisco [Brésil] ; Fabiana Granja [Brésil] ; Marcia T. Garcia [Brésil] ; Maria Luiza Moretti [Brésil] ; Mauricio W. Perroud [Brésil] ; Terezinha M P P. Casti Eiras [Brésil] ; Carolina S. Lazari [Brésil] ; Sarah C. Hill [Royaume-Uni] ; Andreza Aruska De Souza Santos [Royaume-Uni] ; Camila L. Simeoni [Brésil] ; Julia Forato [Brésil] ; Andrei C. Sposito [Brésil] ; Angelica Z. Schreiber [Brésil] ; Magnun N N. Santos [Brésil] ; Camila Zolini De Sá [Brésil] ; Renan P. Souza [Brésil] ; Luciana C. Resende-Moreira [Brésil] ; Mauro M. Teixeira [Brésil] ; Josy Hubner [Brésil] ; Patricia A F. Leme [Brésil] ; Rennan G. Moreira [Brésil] ; Maurício L. Nogueira [Brésil] ; Neil M. Ferguson [Royaume-Uni] ; Silvia F. Costa [Brésil] ; José Luiz Proenca-Modena [Brésil] ; Ana Tereza R. Vasconcelos [Brésil] ; Samir Bhatt [Royaume-Uni] ; Philippe Lemey [Belgique] ; Chieh-Hsi Wu [Royaume-Uni] ; Andrew Rambaut [Royaume-Uni] ; Nick J. Loman [Royaume-Uni] ; Renato S. Aguiar [Brésil] ; Oliver G. Pybus [Royaume-Uni] ; Ester C. Sabino [Brésil] ; Nuno Rodrigues Faria [Royaume-Uni, Brésil]Source :
- Science (New York, N.Y.) [ 1095-9203 ] ; 2020.
Descripteurs français
- KwdFr :
- Analyse spatio-temporelle (MeSH), Betacoronavirus (classification), Betacoronavirus (génétique), Brésil (épidémiologie), Europe (MeSH), Génome viral (MeSH), Humains (MeSH), Infections à coronavirus (diagnostic), Infections à coronavirus (prévention et contrôle), Infections à coronavirus (transmission), Infections à coronavirus (virologie), Infections à coronavirus (épidémiologie), Modèles génétiques (MeSH), Modèles statistiques (MeSH), Pandémies (prévention et contrôle), Phylogenèse (MeSH), Phylogéographie (MeSH), Pneumopathie virale (prévention et contrôle), Pneumopathie virale (transmission), Pneumopathie virale (virologie), Pneumopathie virale (épidémiologie), Population urbaine (MeSH), Taux de reproduction de base (MeSH), Techniques de laboratoire clinique (MeSH), Théorème de Bayes (MeSH), Villes (épidémiologie), Voyage (MeSH), Évolution moléculaire (MeSH).
- MESH :
- diagnostic : Infections à coronavirus.
- génétique : Betacoronavirus.
- prévention et contrôle : Infections à coronavirus, Pandémies, Pneumopathie virale.
- virologie : Infections à coronavirus, Pneumopathie virale.
- épidémiologie : Betacoronavirus, Brésil, Infections à coronavirus, Pneumopathie virale, Villes.
- Analyse spatio-temporelle, Europe, Génome viral, Humains, Modèles génétiques, Modèles statistiques, Phylogenèse, Phylogéographie, Population urbaine, Taux de reproduction de base, Techniques de laboratoire clinique, Théorème de Bayes, Voyage, Évolution moléculaire.
- Wicri :
- geographic : Brésil.
English descriptors
- KwdEn :
- Basic Reproduction Number (MeSH), Bayes Theorem (MeSH), Betacoronavirus (classification), Betacoronavirus (genetics), Brazil (epidemiology), Cities (epidemiology), Clinical Laboratory Techniques (MeSH), Coronavirus Infections (diagnosis), Coronavirus Infections (epidemiology), Coronavirus Infections (prevention & control), Coronavirus Infections (transmission), Coronavirus Infections (virology), Europe (MeSH), Evolution, Molecular (MeSH), Genome, Viral (MeSH), Humans (MeSH), Models, Genetic (MeSH), Models, Statistical (MeSH), Pandemics (prevention & control), Phylogeny (MeSH), Phylogeography (MeSH), Pneumonia, Viral (epidemiology), Pneumonia, Viral (prevention & control), Pneumonia, Viral (transmission), Pneumonia, Viral (virology), Spatio-Temporal Analysis (MeSH), Travel (MeSH), Urban Population (MeSH).
- MESH :
- geographic , epidemiology : Brazil, Cities.
- classification : Betacoronavirus.
- diagnosis : Coronavirus Infections.
- epidemiology : Coronavirus Infections, Pneumonia, Viral.
- genetics : Betacoronavirus.
- prevention & control : Coronavirus Infections, Pandemics, Pneumonia, Viral.
- transmission : Coronavirus Infections, Pneumonia, Viral.
- virology : Coronavirus Infections, Pneumonia, Viral.
- Basic Reproduction Number, Bayes Theorem, Clinical Laboratory Techniques, Europe, Evolution, Molecular, Genome, Viral, Humans, Models, Genetic, Models, Statistical, Phylogeny, Phylogeography, Spatio-Temporal Analysis, Travel, Urban Population.
Abstract
Brazil currently has one of the fastest-growing severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) epidemics in the world. Because of limited available data, assessments of the impact of nonpharmaceutical interventions (NPIs) on this virus spread remain challenging. Using a mobility-driven transmission model, we show that NPIs reduced the reproduction number from >3 to 1 to 1.6 in São Paulo and Rio de Janeiro. Sequencing of 427 new genomes and analysis of a geographically representative genomic dataset identified >100 international virus introductions in Brazil. We estimate that most (76%) of the Brazilian strains fell in three clades that were introduced from Europe between 22 February and 11 March 2020. During the early epidemic phase, we found that SARS-CoV-2 spread mostly locally and within state borders. After this period, despite sharp decreases in air travel, we estimated multiple exportations from large urban centers that coincided with a 25% increase in average traveled distances in national flights. This study sheds new light on the epidemic transmission and evolutionary trajectories of SARS-CoV-2 lineages in Brazil and provides evidence that current interventions remain insufficient to keep virus transmission under control in this country.
DOI: 10.1126/science.abd2161
PubMed: 32703910
PubMed Central: PMC7402630
Affiliations:
- Belgique, Brésil, France, Royaume-Uni
- Angleterre, Grand Londres, Midlands de l'Ouest, Minas Gerais, Oxfordshire, Région de Bruxelles-Capitale, Écosse, État de Rio de Janeiro, État de São Paulo
- Belo Horizonte, Birmingham, Bruxelles, Campinas, Londres, Oxford, Rio de Janeiro, São Paulo, Édimbourg
- Université d'Oxford, Université d'Édimbourg, Université d'État de Campinas, Université de Birmingham, Université de São Paulo, Université fédérale du Minas Gerais, Université libre de Bruxelles
Links toward previous steps (curation, corpus...)
Le document en format XML
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<author><name sortKey="Sales, Flavia C S" sort="Sales, Flavia C S" uniqKey="Sales F" first="Flavia C S" last="Sales">Flavia C S. Sales</name>
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<author><name sortKey="Manuli, Erika R" sort="Manuli, Erika R" uniqKey="Manuli E" first="Erika R" last="Manuli">Erika R. Manuli</name>
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<author><name sortKey="Theze, Julien" sort="Theze, Julien" uniqKey="Theze J" first="Julien" last="Thézé">Julien Thézé</name>
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<author><name sortKey="Almeida, Luiz" sort="Almeida, Luiz" uniqKey="Almeida L" first="Luiz" last="Almeida">Luiz Almeida</name>
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<author><name sortKey="Menezes, Mariane T" sort="Menezes, Mariane T" uniqKey="Menezes M" first="Mariane T" last="Menezes">Mariane T. Menezes</name>
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<author><name sortKey="Voloch, Carolina M" sort="Voloch, Carolina M" uniqKey="Voloch C" first="Carolina M" last="Voloch">Carolina M. Voloch</name>
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<author><name sortKey="Fumagalli, Marcilio J" sort="Fumagalli, Marcilio J" uniqKey="Fumagalli M" first="Marcilio J" last="Fumagalli">Marcilio J. Fumagalli</name>
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<author><name sortKey="Coletti, Thais M" sort="Coletti, Thais M" uniqKey="Coletti T" first="Thaís M" last="Coletti">Thaís M. Coletti</name>
<affiliation wicri:level="4"><nlm:affiliation>Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo</wicri:regionArea>
<placeName><settlement type="city">São Paulo</settlement>
<region type="state">État de São Paulo</region>
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<orgName type="university">Université de São Paulo</orgName>
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<affiliation wicri:level="4"><nlm:affiliation>Departamento de Moléstias Infecciosas e Parasitárias, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Departamento de Moléstias Infecciosas e Parasitárias, Faculdade de Medicina da Universidade de São Paulo, São Paulo</wicri:regionArea>
<placeName><settlement type="city">São Paulo</settlement>
<region type="state">État de São Paulo</region>
</placeName>
<orgName type="university">Université de São Paulo</orgName>
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<author><name sortKey="Da Silva, Camila A M" sort="Da Silva, Camila A M" uniqKey="Da Silva C" first="Camila A M" last="Da Silva">Camila A M. Da Silva</name>
<affiliation wicri:level="4"><nlm:affiliation>Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</nlm:affiliation>
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<country xml:lang="fr">Brésil</country>
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<author><name sortKey="Ramundo, Mariana S" sort="Ramundo, Mariana S" uniqKey="Ramundo M" first="Mariana S" last="Ramundo">Mariana S. Ramundo</name>
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</placeName>
<orgName type="university">Université de São Paulo</orgName>
</affiliation>
<affiliation wicri:level="4"><nlm:affiliation>Departamento de Moléstias Infecciosas e Parasitárias, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Departamento de Moléstias Infecciosas e Parasitárias, Faculdade de Medicina da Universidade de São Paulo, São Paulo</wicri:regionArea>
<placeName><settlement type="city">São Paulo</settlement>
<region type="state">État de São Paulo</region>
</placeName>
<orgName type="university">Université de São Paulo</orgName>
</affiliation>
</author>
<author><name sortKey="Amorim, Mariene R" sort="Amorim, Mariene R" uniqKey="Amorim M" first="Mariene R" last="Amorim">Mariene R. Amorim</name>
<affiliation wicri:level="4"><nlm:affiliation>Departamento de Genética, Evolução, Microbiologia e Imunologia, Instituto de Biologia, Universidade Estadual de Campinas, Campinas, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Departamento de Genética, Evolução, Microbiologia e Imunologia, Instituto de Biologia, Universidade Estadual de Campinas, Campinas</wicri:regionArea>
<orgName type="university">Université d'État de Campinas</orgName>
<placeName><settlement type="city">Campinas</settlement>
<region type="state">État de São Paulo</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Hoeltgebaum, Henrique H" sort="Hoeltgebaum, Henrique H" uniqKey="Hoeltgebaum H" first="Henrique H" last="Hoeltgebaum">Henrique H. Hoeltgebaum</name>
<affiliation wicri:level="3"><nlm:affiliation>Department of Mathematics, Imperial College London, London, UK.</nlm:affiliation>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>Department of Mathematics, Imperial College London, London</wicri:regionArea>
<placeName><settlement type="city">Londres</settlement>
<region type="country">Angleterre</region>
<region type="région" nuts="1">Grand Londres</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Mishra, Swapnil" sort="Mishra, Swapnil" uniqKey="Mishra S" first="Swapnil" last="Mishra">Swapnil Mishra</name>
<affiliation wicri:level="3"><nlm:affiliation>MRC Centre for Global Infectious Disease Analysis, J-IDEA, Imperial College London, London, UK.</nlm:affiliation>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>MRC Centre for Global Infectious Disease Analysis, J-IDEA, Imperial College London, London</wicri:regionArea>
<placeName><settlement type="city">Londres</settlement>
<region type="country">Angleterre</region>
<region type="région" nuts="1">Grand Londres</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Gill, Mandev S" sort="Gill, Mandev S" uniqKey="Gill M" first="Mandev S" last="Gill">Mandev S. Gill</name>
<affiliation wicri:level="1"><nlm:affiliation>Department of Microbiology, Immunology and Transplantation, Rega Institute, KU Leuven, Leuven, Belgium.</nlm:affiliation>
<country xml:lang="fr">Belgique</country>
<wicri:regionArea>Department of Microbiology, Immunology and Transplantation, Rega Institute, KU Leuven, Leuven</wicri:regionArea>
<wicri:noRegion>Leuven</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Carvalho, Luiz M" sort="Carvalho, Luiz M" uniqKey="Carvalho L" first="Luiz M" last="Carvalho">Luiz M. Carvalho</name>
<affiliation wicri:level="3"><nlm:affiliation>Escola de Matemática Aplicada (EMAp), Fundação Getúlio Vargas, Rio de Janeiro, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Escola de Matemática Aplicada (EMAp), Fundação Getúlio Vargas, Rio de Janeiro</wicri:regionArea>
<placeName><settlement type="city">Rio de Janeiro</settlement>
<region type="state">État de Rio de Janeiro</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Buss, Lewis F" sort="Buss, Lewis F" uniqKey="Buss L" first="Lewis F" last="Buss">Lewis F. Buss</name>
<affiliation wicri:level="4"><nlm:affiliation>Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo</wicri:regionArea>
<placeName><settlement type="city">São Paulo</settlement>
<region type="state">État de São Paulo</region>
</placeName>
<orgName type="university">Université de São Paulo</orgName>
</affiliation>
</author>
<author><name sortKey="Prete, Carlos A" sort="Prete, Carlos A" uniqKey="Prete C" first="Carlos A" last="Prete">Carlos A. Prete</name>
<affiliation wicri:level="4"><nlm:affiliation>Department of Electronic Systems Engineering, University of São Paulo, São Paulo, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Department of Electronic Systems Engineering, University of São Paulo, São Paulo</wicri:regionArea>
<placeName><settlement type="city">São Paulo</settlement>
<region type="state">État de São Paulo</region>
</placeName>
<orgName type="university">Université de São Paulo</orgName>
</affiliation>
</author>
<author><name sortKey="Ashworth, Jordan" sort="Ashworth, Jordan" uniqKey="Ashworth J" first="Jordan" last="Ashworth">Jordan Ashworth</name>
<affiliation wicri:level="4"><nlm:affiliation>Usher Institute, University of Edinburgh, Edinburgh, UK.</nlm:affiliation>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>Usher Institute, University of Edinburgh, Edinburgh</wicri:regionArea>
<placeName><settlement type="city">Édimbourg</settlement>
<region type="country">Écosse</region>
</placeName>
<orgName type="university">Université d'Édimbourg</orgName>
</affiliation>
</author>
<author><name sortKey="Nakaya, Helder I" sort="Nakaya, Helder I" uniqKey="Nakaya H" first="Helder I" last="Nakaya">Helder I. Nakaya</name>
<affiliation wicri:level="4"><nlm:affiliation>Department of Clinical and Toxicological Analyses, School of Pharmaceutical Sciences, University of São Paulo, São Paulo, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Department of Clinical and Toxicological Analyses, School of Pharmaceutical Sciences, University of São Paulo, São Paulo</wicri:regionArea>
<placeName><settlement type="city">São Paulo</settlement>
<region type="state">État de São Paulo</region>
</placeName>
<orgName type="university">Université de São Paulo</orgName>
</affiliation>
</author>
<author><name sortKey="Peixoto, Pedro S" sort="Peixoto, Pedro S" uniqKey="Peixoto P" first="Pedro S" last="Peixoto">Pedro S. Peixoto</name>
<affiliation wicri:level="4"><nlm:affiliation>Departamento de Matemática Aplicada, Instituto de Matemática e Estatística, Universidade de São Paulo, São Paulo, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Departamento de Matemática Aplicada, Instituto de Matemática e Estatística, Universidade de São Paulo, São Paulo</wicri:regionArea>
<placeName><settlement type="city">São Paulo</settlement>
<region type="state">État de São Paulo</region>
</placeName>
<orgName type="university">Université de São Paulo</orgName>
</affiliation>
</author>
<author><name sortKey="Brady, Oliver J" sort="Brady, Oliver J" uniqKey="Brady O" first="Oliver J" last="Brady">Oliver J. Brady</name>
<affiliation wicri:level="3"><nlm:affiliation>Department of Infectious Disease Epidemiology, Faculty of Epidemiology and Population Health, London School of Hygiene & Tropical Medicine, London, UK.</nlm:affiliation>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>Department of Infectious Disease Epidemiology, Faculty of Epidemiology and Population Health, London School of Hygiene & Tropical Medicine, London</wicri:regionArea>
<placeName><settlement type="city">Londres</settlement>
<region type="country">Angleterre</region>
<region type="région" nuts="1">Grand Londres</region>
</placeName>
</affiliation>
<affiliation wicri:level="3"><nlm:affiliation>Centre for the Mathematical Modelling of Infectious Diseases, London School of Hygiene & Tropical Medicine, London, UK.</nlm:affiliation>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>Centre for the Mathematical Modelling of Infectious Diseases, London School of Hygiene & Tropical Medicine, London</wicri:regionArea>
<placeName><settlement type="city">Londres</settlement>
<region type="country">Angleterre</region>
<region type="région" nuts="1">Grand Londres</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Nicholls, Samuel M" sort="Nicholls, Samuel M" uniqKey="Nicholls S" first="Samuel M" last="Nicholls">Samuel M. Nicholls</name>
<affiliation wicri:level="4"><nlm:affiliation>Institute for Microbiology and Infection, University of Birmingham, Birmingham, UK.</nlm:affiliation>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>Institute for Microbiology and Infection, University of Birmingham, Birmingham</wicri:regionArea>
<placeName><settlement type="city">Birmingham</settlement>
<region type="country">Angleterre</region>
<region type="région" nuts="1">Midlands de l'Ouest</region>
</placeName>
<orgName type="university">Université de Birmingham</orgName>
</affiliation>
</author>
<author><name sortKey="Tanuri, Amilcar" sort="Tanuri, Amilcar" uniqKey="Tanuri A" first="Amilcar" last="Tanuri">Amilcar Tanuri</name>
<affiliation wicri:level="3"><nlm:affiliation>Departamento de Genética, Instituto de Biologia, Universidade Federal do Rio de Janeiro, Rio de Janeiro, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Departamento de Genética, Instituto de Biologia, Universidade Federal do Rio de Janeiro, Rio de Janeiro</wicri:regionArea>
<placeName><settlement type="city">Rio de Janeiro</settlement>
<region type="state">État de Rio de Janeiro</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Rossi, Atila D" sort="Rossi, Atila D" uniqKey="Rossi A" first="Átila D" last="Rossi">Átila D. Rossi</name>
<affiliation wicri:level="3"><nlm:affiliation>Departamento de Genética, Instituto de Biologia, Universidade Federal do Rio de Janeiro, Rio de Janeiro, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Departamento de Genética, Instituto de Biologia, Universidade Federal do Rio de Janeiro, Rio de Janeiro</wicri:regionArea>
<placeName><settlement type="city">Rio de Janeiro</settlement>
<region type="state">État de Rio de Janeiro</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Braga, Carlos K V" sort="Braga, Carlos K V" uniqKey="Braga C" first="Carlos K V" last="Braga">Carlos K V. Braga</name>
<affiliation wicri:level="1"><nlm:affiliation>Institute for Applied Economic Research, Brasília, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Institute for Applied Economic Research, Brasília</wicri:regionArea>
<wicri:noRegion>Brasília</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Gerber, Alexandra L" sort="Gerber, Alexandra L" uniqKey="Gerber A" first="Alexandra L" last="Gerber">Alexandra L. Gerber</name>
<affiliation wicri:level="1"><nlm:affiliation>Laboratório de Bioinformática, Laboratório Nacional de Computação Científica, Petrópolis, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Laboratório de Bioinformática, Laboratório Nacional de Computação Científica, Petrópolis</wicri:regionArea>
<wicri:noRegion>Petrópolis</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="De C Guimaraes, Ana Paula" sort="De C Guimaraes, Ana Paula" uniqKey="De C Guimaraes A" first="Ana Paula" last="De C Guimarães">Ana Paula De C Guimarães</name>
<affiliation wicri:level="1"><nlm:affiliation>Laboratório de Bioinformática, Laboratório Nacional de Computação Científica, Petrópolis, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Laboratório de Bioinformática, Laboratório Nacional de Computação Científica, Petrópolis</wicri:regionArea>
<wicri:noRegion>Petrópolis</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Gaburo, Nelson" sort="Gaburo, Nelson" uniqKey="Gaburo N" first="Nelson" last="Gaburo">Nelson Gaburo</name>
<affiliation wicri:level="3"><nlm:affiliation>DB Diagnósticos do Brasil, São Paulo, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>DB Diagnósticos do Brasil, São Paulo</wicri:regionArea>
<placeName><settlement type="city">São Paulo</settlement>
<region type="state">État de São Paulo</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Alencar, Cecila Salete" sort="Alencar, Cecila Salete" uniqKey="Alencar C" first="Cecila Salete" last="Alencar">Cecila Salete Alencar</name>
<affiliation wicri:level="4"><nlm:affiliation>LIM 03 Laboratório de Medicina Laboratorial, Hospital das Clínicas Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>LIM 03 Laboratório de Medicina Laboratorial, Hospital das Clínicas Faculdade de Medicina da Universidade de São Paulo, São Paulo</wicri:regionArea>
<placeName><settlement type="city">São Paulo</settlement>
<region type="state">État de São Paulo</region>
</placeName>
<orgName type="university">Université de São Paulo</orgName>
</affiliation>
</author>
<author><name sortKey="Ferreira, Alessandro C S" sort="Ferreira, Alessandro C S" uniqKey="Ferreira A" first="Alessandro C S" last="Ferreira">Alessandro C S. Ferreira</name>
<affiliation wicri:level="3"><nlm:affiliation>Instituto Hermes Pardini, Belo Horizonte, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Instituto Hermes Pardini, Belo Horizonte</wicri:regionArea>
<placeName><settlement type="city">Belo Horizonte</settlement>
<region type="state">Minas Gerais</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Lima, Cristiano X" sort="Lima, Cristiano X" uniqKey="Lima C" first="Cristiano X" last="Lima">Cristiano X. Lima</name>
<affiliation wicri:level="4"><nlm:affiliation>Departamento de Cirurgia, Faculdade de Medicina, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Departamento de Cirurgia, Faculdade de Medicina, Universidade Federal de Minas Gerais, Belo Horizonte</wicri:regionArea>
<placeName><settlement type="city">Belo Horizonte</settlement>
<region type="state">Minas Gerais</region>
</placeName>
<orgName type="university">Université fédérale du Minas Gerais</orgName>
</affiliation>
<affiliation wicri:level="3"><nlm:affiliation>Simile Instituto de Imunologia Aplicada Ltda, Belo Horizonte, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Simile Instituto de Imunologia Aplicada Ltda, Belo Horizonte</wicri:regionArea>
<placeName><settlement type="city">Belo Horizonte</settlement>
<region type="state">Minas Gerais</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Levi, Jose Eduardo" sort="Levi, Jose Eduardo" uniqKey="Levi J" first="José Eduardo" last="Levi">José Eduardo Levi</name>
<affiliation wicri:level="3"><nlm:affiliation>Laboratório DASA, São Paulo, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Laboratório DASA, São Paulo</wicri:regionArea>
<placeName><settlement type="city">São Paulo</settlement>
<region type="state">État de São Paulo</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Granato, Celso" sort="Granato, Celso" uniqKey="Granato C" first="Celso" last="Granato">Celso Granato</name>
<affiliation wicri:level="3"><nlm:affiliation>Laboratório Fleury, São Paulo, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Laboratório Fleury, São Paulo</wicri:regionArea>
<placeName><settlement type="city">São Paulo</settlement>
<region type="state">État de São Paulo</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Ferreira, Giulia M" sort="Ferreira, Giulia M" uniqKey="Ferreira G" first="Giulia M" last="Ferreira">Giulia M. Ferreira</name>
<affiliation wicri:level="1"><nlm:affiliation>Laboratório de Virologia, Instituto de Ciências Biomédicas, Universidade Federal de Uberlândia, Uberlândia, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Laboratório de Virologia, Instituto de Ciências Biomédicas, Universidade Federal de Uberlândia, Uberlândia</wicri:regionArea>
<wicri:noRegion>Uberlândia</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Francisco, Ronaldo S" sort="Francisco, Ronaldo S" uniqKey="Francisco R" first="Ronaldo S" last="Francisco">Ronaldo S. Francisco</name>
<affiliation wicri:level="1"><nlm:affiliation>Laboratório de Bioinformática, Laboratório Nacional de Computação Científica, Petrópolis, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Laboratório de Bioinformática, Laboratório Nacional de Computação Científica, Petrópolis</wicri:regionArea>
<wicri:noRegion>Petrópolis</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Granja, Fabiana" sort="Granja, Fabiana" uniqKey="Granja F" first="Fabiana" last="Granja">Fabiana Granja</name>
<affiliation wicri:level="4"><nlm:affiliation>Departamento de Genética, Evolução, Microbiologia e Imunologia, Instituto de Biologia, Universidade Estadual de Campinas, Campinas, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Departamento de Genética, Evolução, Microbiologia e Imunologia, Instituto de Biologia, Universidade Estadual de Campinas, Campinas</wicri:regionArea>
<orgName type="university">Université d'État de Campinas</orgName>
<placeName><settlement type="city">Campinas</settlement>
<region type="state">État de São Paulo</region>
</placeName>
</affiliation>
<affiliation wicri:level="1"><nlm:affiliation>Centro de Estudos da Biodiversidade, Universidade Federal de Roraima, Boa Vista, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Centro de Estudos da Biodiversidade, Universidade Federal de Roraima, Boa Vista</wicri:regionArea>
<wicri:noRegion>Boa Vista</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Garcia, Marcia T" sort="Garcia, Marcia T" uniqKey="Garcia M" first="Marcia T" last="Garcia">Marcia T. Garcia</name>
<affiliation wicri:level="4"><nlm:affiliation>Divisão de Doenças Infecciosas, Faculdade de Ciências Médicas, Universidade Estadual de Campinas, Campinas, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Divisão de Doenças Infecciosas, Faculdade de Ciências Médicas, Universidade Estadual de Campinas, Campinas</wicri:regionArea>
<orgName type="university">Université d'État de Campinas</orgName>
<placeName><settlement type="city">Campinas</settlement>
<region type="state">État de São Paulo</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Moretti, Maria Luiza" sort="Moretti, Maria Luiza" uniqKey="Moretti M" first="Maria Luiza" last="Moretti">Maria Luiza Moretti</name>
<affiliation wicri:level="4"><nlm:affiliation>Divisão de Doenças Infecciosas, Faculdade de Ciências Médicas, Universidade Estadual de Campinas, Campinas, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Divisão de Doenças Infecciosas, Faculdade de Ciências Médicas, Universidade Estadual de Campinas, Campinas</wicri:regionArea>
<orgName type="university">Université d'État de Campinas</orgName>
<placeName><settlement type="city">Campinas</settlement>
<region type="state">État de São Paulo</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Perroud, Mauricio W" sort="Perroud, Mauricio W" uniqKey="Perroud M" first="Mauricio W" last="Perroud">Mauricio W. Perroud</name>
<affiliation wicri:level="4"><nlm:affiliation>Hospital Estadual Sumaré, Universidade Estadual de Campinas, Campinas, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Hospital Estadual Sumaré, Universidade Estadual de Campinas, Campinas</wicri:regionArea>
<orgName type="university">Université d'État de Campinas</orgName>
<placeName><settlement type="city">Campinas</settlement>
<region type="state">État de São Paulo</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Casti Eiras, Terezinha M P P" sort="Casti Eiras, Terezinha M P P" uniqKey="Casti Eiras T" first="Terezinha M P P" last="Casti Eiras">Terezinha M P P. Casti Eiras</name>
<affiliation wicri:level="3"><nlm:affiliation>Departamento de Doenças Infecciosas e Parasitárias, Faculdade de Medicina, Universidade Federal do Rio de Janeiro, Rio de Janeiro, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Departamento de Doenças Infecciosas e Parasitárias, Faculdade de Medicina, Universidade Federal do Rio de Janeiro, Rio de Janeiro</wicri:regionArea>
<placeName><settlement type="city">Rio de Janeiro</settlement>
<region type="state">État de Rio de Janeiro</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Lazari, Carolina S" sort="Lazari, Carolina S" uniqKey="Lazari C" first="Carolina S" last="Lazari">Carolina S. Lazari</name>
<affiliation wicri:level="4"><nlm:affiliation>Divisão de Laboratório Central do Hospital das Clínicas, da Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Divisão de Laboratório Central do Hospital das Clínicas, da Faculdade de Medicina da Universidade de São Paulo, São Paulo</wicri:regionArea>
<placeName><settlement type="city">São Paulo</settlement>
<region type="state">État de São Paulo</region>
</placeName>
<orgName type="university">Université de São Paulo</orgName>
</affiliation>
</author>
<author><name sortKey="Hill, Sarah C" sort="Hill, Sarah C" uniqKey="Hill S" first="Sarah C" last="Hill">Sarah C. Hill</name>
<affiliation wicri:level="4"><nlm:affiliation>Department of Zoology, University of Oxford, Oxford, UK.</nlm:affiliation>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>Department of Zoology, University of Oxford, Oxford</wicri:regionArea>
<placeName><settlement type="city">Oxford</settlement>
<region type="country">Angleterre</region>
<region type="comté" nuts="2">Oxfordshire</region>
</placeName>
<orgName type="university">Université d'Oxford</orgName>
</affiliation>
<affiliation wicri:level="1"><nlm:affiliation>Department of Pathobiology and Population Sciences, Royal Veterinary College, Hatfield, UK.</nlm:affiliation>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>Department of Pathobiology and Population Sciences, Royal Veterinary College, Hatfield</wicri:regionArea>
<wicri:noRegion>Hatfield</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="De Souza Santos, Andreza Aruska" sort="De Souza Santos, Andreza Aruska" uniqKey="De Souza Santos A" first="Andreza Aruska" last="De Souza Santos">Andreza Aruska De Souza Santos</name>
<affiliation wicri:level="4"><nlm:affiliation>University of Oxford, Latin American Centre, Oxford School of Global and Area Studies, Oxford, UK.</nlm:affiliation>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>University of Oxford, Latin American Centre, Oxford School of Global and Area Studies, Oxford</wicri:regionArea>
<placeName><settlement type="city">Oxford</settlement>
<region type="country">Angleterre</region>
<region type="comté" nuts="2">Oxfordshire</region>
</placeName>
<orgName type="university">Université d'Oxford</orgName>
</affiliation>
</author>
<author><name sortKey="Simeoni, Camila L" sort="Simeoni, Camila L" uniqKey="Simeoni C" first="Camila L" last="Simeoni">Camila L. Simeoni</name>
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<author><name sortKey="Forato, Julia" sort="Forato, Julia" uniqKey="Forato J" first="Julia" last="Forato">Julia Forato</name>
<affiliation wicri:level="4"><nlm:affiliation>Departamento de Genética, Evolução, Microbiologia e Imunologia, Instituto de Biologia, Universidade Estadual de Campinas, Campinas, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
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<author><name sortKey="Sposito, Andrei C" sort="Sposito, Andrei C" uniqKey="Sposito A" first="Andrei C" last="Sposito">Andrei C. Sposito</name>
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<country xml:lang="fr">Brésil</country>
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<affiliation wicri:level="4"><nlm:affiliation>Departamento de Patologia Clínica, Faculdade de Ciências Médicas, Universidade Estadual de Campinas, Campinas, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
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<author><name sortKey="Santos, Magnun N N" sort="Santos, Magnun N N" uniqKey="Santos M" first="Magnun N N" last="Santos">Magnun N N. Santos</name>
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<country xml:lang="fr">Brésil</country>
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<author><name sortKey="De Sa, Camila Zolini" sort="De Sa, Camila Zolini" uniqKey="De Sa C" first="Camila Zolini" last="De Sá">Camila Zolini De Sá</name>
<affiliation wicri:level="4"><nlm:affiliation>Departamento de Genética, Ecologia e Evolução, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
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<orgName type="university">Université fédérale du Minas Gerais</orgName>
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<author><name sortKey="Souza, Renan P" sort="Souza, Renan P" uniqKey="Souza R" first="Renan P" last="Souza">Renan P. Souza</name>
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<country xml:lang="fr">Brésil</country>
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<author><name sortKey="Resende Moreira, Luciana C" sort="Resende Moreira, Luciana C" uniqKey="Resende Moreira L" first="Luciana C" last="Resende-Moreira">Luciana C. Resende-Moreira</name>
<affiliation wicri:level="4"><nlm:affiliation>Departamento de Botânica, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Departamento de Botânica, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte</wicri:regionArea>
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<orgName type="university">Université fédérale du Minas Gerais</orgName>
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<author><name sortKey="Teixeira, Mauro M" sort="Teixeira, Mauro M" uniqKey="Teixeira M" first="Mauro M" last="Teixeira">Mauro M. Teixeira</name>
<affiliation wicri:level="4"><nlm:affiliation>Departamento de Bioquímica e Imunologia, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
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<author><name sortKey="Hubner, Josy" sort="Hubner, Josy" uniqKey="Hubner J" first="Josy" last="Hubner">Josy Hubner</name>
<affiliation wicri:level="4"><nlm:affiliation>Departamento de Biologia Celular, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Departamento de Biologia Celular, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte</wicri:regionArea>
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<author><name sortKey="Leme, Patricia A F" sort="Leme, Patricia A F" uniqKey="Leme P" first="Patricia A F" last="Leme">Patricia A F. Leme</name>
<affiliation wicri:level="4"><nlm:affiliation>Centro de Saúde da Comunidade, Universidade Estadual de Campinas, Campinas, Brazil.</nlm:affiliation>
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<author><name sortKey="Moreira, Rennan G" sort="Moreira, Rennan G" uniqKey="Moreira R" first="Rennan G" last="Moreira">Rennan G. Moreira</name>
<affiliation wicri:level="4"><nlm:affiliation>Centro de Laboratórios Multiusuários, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
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<author><name sortKey="Nogueira, Mauricio L" sort="Nogueira, Mauricio L" uniqKey="Nogueira M" first="Maurício L" last="Nogueira">Maurício L. Nogueira</name>
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<author><name sortKey="Ferguson, Neil M" sort="Ferguson, Neil M" uniqKey="Ferguson N" first="Neil M" last="Ferguson">Neil M. Ferguson</name>
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<author><name sortKey="Costa, Silvia F" sort="Costa, Silvia F" uniqKey="Costa S" first="Silvia F" last="Costa">Silvia F. Costa</name>
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<author><name sortKey="Proenca Modena, Jose Luiz" sort="Proenca Modena, Jose Luiz" uniqKey="Proenca Modena J" first="José Luiz" last="Proenca-Modena">José Luiz Proenca-Modena</name>
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<author><name sortKey="Bhatt, Samir" sort="Bhatt, Samir" uniqKey="Bhatt S" first="Samir" last="Bhatt">Samir Bhatt</name>
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<author><name sortKey="Lemey, Philippe" sort="Lemey, Philippe" uniqKey="Lemey P" first="Philippe" last="Lemey">Philippe Lemey</name>
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<author><name sortKey="Wu, Chieh Hsi" sort="Wu, Chieh Hsi" uniqKey="Wu C" first="Chieh-Hsi" last="Wu">Chieh-Hsi Wu</name>
<affiliation wicri:level="1"><nlm:affiliation>Mathematical Sciences, University of Southampton, Southampton, UK.</nlm:affiliation>
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<author><name sortKey="Rambaut, Andrew" sort="Rambaut, Andrew" uniqKey="Rambaut A" first="Andrew" last="Rambaut">Andrew Rambaut</name>
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<orgName type="university">Université d'Édimbourg</orgName>
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<author><name sortKey="Loman, Nick J" sort="Loman, Nick J" uniqKey="Loman N" first="Nick J" last="Loman">Nick J. Loman</name>
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<author><name sortKey="Aguiar, Renato S" sort="Aguiar, Renato S" uniqKey="Aguiar R" first="Renato S" last="Aguiar">Renato S. Aguiar</name>
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<country xml:lang="fr">Brésil</country>
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<author><name sortKey="Pybus, Oliver G" sort="Pybus, Oliver G" uniqKey="Pybus O" first="Oliver G" last="Pybus">Oliver G. Pybus</name>
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<author><name sortKey="Faria, Nuno Rodrigues" sort="Faria, Nuno Rodrigues" uniqKey="Faria N" first="Nuno Rodrigues" last="Faria">Nuno Rodrigues Faria</name>
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<sourceDesc><biblStruct><analytic><title xml:lang="en">Evolution and epidemic spread of SARS-CoV-2 in Brazil.</title>
<author><name sortKey="Candido, Darlan S" sort="Candido, Darlan S" uniqKey="Candido D" first="Darlan S" last="Candido">Darlan S. Candido</name>
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<affiliation wicri:level="4"><nlm:affiliation>Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</nlm:affiliation>
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</author>
<author><name sortKey="Claro, Ingra M" sort="Claro, Ingra M" uniqKey="Claro I" first="Ingra M" last="Claro">Ingra M. Claro</name>
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<author><name sortKey="De Jesus, Jaqueline G" sort="De Jesus, Jaqueline G" uniqKey="De Jesus J" first="Jaqueline G" last="De Jesus">Jaqueline G. De Jesus</name>
<affiliation wicri:level="4"><nlm:affiliation>Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
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</placeName>
<orgName type="university">Université de São Paulo</orgName>
</affiliation>
<affiliation wicri:level="4"><nlm:affiliation>Departamento de Moléstias Infecciosas e Parasitárias, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Departamento de Moléstias Infecciosas e Parasitárias, Faculdade de Medicina da Universidade de São Paulo, São Paulo</wicri:regionArea>
<placeName><settlement type="city">São Paulo</settlement>
<region type="state">État de São Paulo</region>
</placeName>
<orgName type="university">Université de São Paulo</orgName>
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</author>
<author><name sortKey="Souza, William M" sort="Souza, William M" uniqKey="Souza W" first="William M" last="Souza">William M. Souza</name>
<affiliation wicri:level="1"><nlm:affiliation>Centro de Pesquisa em Virologia, Faculdade de Medicina de Ribeirão Preto, Ribeirão Preto, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Centro de Pesquisa em Virologia, Faculdade de Medicina de Ribeirão Preto, Ribeirão Preto</wicri:regionArea>
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<author><name sortKey="Moreira, Filipe R R" sort="Moreira, Filipe R R" uniqKey="Moreira F" first="Filipe R R" last="Moreira">Filipe R R. Moreira</name>
<affiliation wicri:level="3"><nlm:affiliation>Departamento de Genética, Instituto de Biologia, Universidade Federal do Rio de Janeiro, Rio de Janeiro, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Departamento de Genética, Instituto de Biologia, Universidade Federal do Rio de Janeiro, Rio de Janeiro</wicri:regionArea>
<placeName><settlement type="city">Rio de Janeiro</settlement>
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<author><name sortKey="Dellicour, Simon" sort="Dellicour, Simon" uniqKey="Dellicour S" first="Simon" last="Dellicour">Simon Dellicour</name>
<affiliation wicri:level="4"><nlm:affiliation>Spatial Epidemiology Lab, Université Libre de Bruxelles, Brussels, Belgium.</nlm:affiliation>
<country xml:lang="fr">Belgique</country>
<wicri:regionArea>Spatial Epidemiology Lab, Université Libre de Bruxelles, Brussels</wicri:regionArea>
<placeName><settlement type="city">Bruxelles</settlement>
<region nuts="2">Région de Bruxelles-Capitale</region>
</placeName>
<orgName type="university">Université libre de Bruxelles</orgName>
</affiliation>
<affiliation wicri:level="1"><nlm:affiliation>Department of Microbiology, Immunology and Transplantation, Rega Institute, KU Leuven, Leuven, Belgium.</nlm:affiliation>
<country xml:lang="fr">Belgique</country>
<wicri:regionArea>Department of Microbiology, Immunology and Transplantation, Rega Institute, KU Leuven, Leuven</wicri:regionArea>
<wicri:noRegion>Leuven</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Mellan, Thomas A" sort="Mellan, Thomas A" uniqKey="Mellan T" first="Thomas A" last="Mellan">Thomas A. Mellan</name>
<affiliation wicri:level="3"><nlm:affiliation>MRC Centre for Global Infectious Disease Analysis, J-IDEA, Imperial College London, London, UK.</nlm:affiliation>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>MRC Centre for Global Infectious Disease Analysis, J-IDEA, Imperial College London, London</wicri:regionArea>
<placeName><settlement type="city">Londres</settlement>
<region type="country">Angleterre</region>
<region type="région" nuts="1">Grand Londres</region>
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</author>
<author><name sortKey="Du Plessis, Louis" sort="Du Plessis, Louis" uniqKey="Du Plessis L" first="Louis" last="Du Plessis">Louis Du Plessis</name>
<affiliation wicri:level="4"><nlm:affiliation>Department of Zoology, University of Oxford, Oxford, UK.</nlm:affiliation>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>Department of Zoology, University of Oxford, Oxford</wicri:regionArea>
<placeName><settlement type="city">Oxford</settlement>
<region type="country">Angleterre</region>
<region type="comté" nuts="2">Oxfordshire</region>
</placeName>
<orgName type="university">Université d'Oxford</orgName>
</affiliation>
</author>
<author><name sortKey="Pereira, Rafael H M" sort="Pereira, Rafael H M" uniqKey="Pereira R" first="Rafael H M" last="Pereira">Rafael H M. Pereira</name>
<affiliation wicri:level="1"><nlm:affiliation>Institute for Applied Economic Research, Brasília, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Institute for Applied Economic Research, Brasília</wicri:regionArea>
<wicri:noRegion>Brasília</wicri:noRegion>
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</author>
<author><name sortKey="Sales, Flavia C S" sort="Sales, Flavia C S" uniqKey="Sales F" first="Flavia C S" last="Sales">Flavia C S. Sales</name>
<affiliation wicri:level="4"><nlm:affiliation>Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo</wicri:regionArea>
<placeName><settlement type="city">São Paulo</settlement>
<region type="state">État de São Paulo</region>
</placeName>
<orgName type="university">Université de São Paulo</orgName>
</affiliation>
<affiliation wicri:level="4"><nlm:affiliation>Departamento de Moléstias Infecciosas e Parasitárias, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Departamento de Moléstias Infecciosas e Parasitárias, Faculdade de Medicina da Universidade de São Paulo, São Paulo</wicri:regionArea>
<placeName><settlement type="city">São Paulo</settlement>
<region type="state">État de São Paulo</region>
</placeName>
<orgName type="university">Université de São Paulo</orgName>
</affiliation>
</author>
<author><name sortKey="Manuli, Erika R" sort="Manuli, Erika R" uniqKey="Manuli E" first="Erika R" last="Manuli">Erika R. Manuli</name>
<affiliation wicri:level="4"><nlm:affiliation>Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo</wicri:regionArea>
<placeName><settlement type="city">São Paulo</settlement>
<region type="state">État de São Paulo</region>
</placeName>
<orgName type="university">Université de São Paulo</orgName>
</affiliation>
<affiliation wicri:level="4"><nlm:affiliation>Departamento de Moléstias Infecciosas e Parasitárias, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Departamento de Moléstias Infecciosas e Parasitárias, Faculdade de Medicina da Universidade de São Paulo, São Paulo</wicri:regionArea>
<placeName><settlement type="city">São Paulo</settlement>
<region type="state">État de São Paulo</region>
</placeName>
<orgName type="university">Université de São Paulo</orgName>
</affiliation>
</author>
<author><name sortKey="Theze, Julien" sort="Theze, Julien" uniqKey="Theze J" first="Julien" last="Thézé">Julien Thézé</name>
<affiliation wicri:level="1"><nlm:affiliation>Université Clermont Auvergne, INRAE, VetAgro Sup, UMR EPIA, Saint-Genès-Champanelle, France.</nlm:affiliation>
<country xml:lang="fr">France</country>
<wicri:regionArea>Université Clermont Auvergne, INRAE, VetAgro Sup, UMR EPIA, Saint-Genès-Champanelle</wicri:regionArea>
<wicri:noRegion>Saint-Genès-Champanelle</wicri:noRegion>
<wicri:noRegion>Saint-Genès-Champanelle</wicri:noRegion>
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</author>
<author><name sortKey="Almeida, Luiz" sort="Almeida, Luiz" uniqKey="Almeida L" first="Luiz" last="Almeida">Luiz Almeida</name>
<affiliation wicri:level="1"><nlm:affiliation>Laboratório de Bioinformática, Laboratório Nacional de Computação Científica, Petrópolis, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Laboratório de Bioinformática, Laboratório Nacional de Computação Científica, Petrópolis</wicri:regionArea>
<wicri:noRegion>Petrópolis</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Menezes, Mariane T" sort="Menezes, Mariane T" uniqKey="Menezes M" first="Mariane T" last="Menezes">Mariane T. Menezes</name>
<affiliation wicri:level="3"><nlm:affiliation>Departamento de Genética, Instituto de Biologia, Universidade Federal do Rio de Janeiro, Rio de Janeiro, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Departamento de Genética, Instituto de Biologia, Universidade Federal do Rio de Janeiro, Rio de Janeiro</wicri:regionArea>
<placeName><settlement type="city">Rio de Janeiro</settlement>
<region type="state">État de Rio de Janeiro</region>
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</affiliation>
</author>
<author><name sortKey="Voloch, Carolina M" sort="Voloch, Carolina M" uniqKey="Voloch C" first="Carolina M" last="Voloch">Carolina M. Voloch</name>
<affiliation wicri:level="3"><nlm:affiliation>Departamento de Genética, Instituto de Biologia, Universidade Federal do Rio de Janeiro, Rio de Janeiro, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Departamento de Genética, Instituto de Biologia, Universidade Federal do Rio de Janeiro, Rio de Janeiro</wicri:regionArea>
<placeName><settlement type="city">Rio de Janeiro</settlement>
<region type="state">État de Rio de Janeiro</region>
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</affiliation>
</author>
<author><name sortKey="Fumagalli, Marcilio J" sort="Fumagalli, Marcilio J" uniqKey="Fumagalli M" first="Marcilio J" last="Fumagalli">Marcilio J. Fumagalli</name>
<affiliation wicri:level="1"><nlm:affiliation>Centro de Pesquisa em Virologia, Faculdade de Medicina de Ribeirão Preto, Ribeirão Preto, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Centro de Pesquisa em Virologia, Faculdade de Medicina de Ribeirão Preto, Ribeirão Preto</wicri:regionArea>
<wicri:noRegion>Ribeirão Preto</wicri:noRegion>
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</author>
<author><name sortKey="Coletti, Thais M" sort="Coletti, Thais M" uniqKey="Coletti T" first="Thaís M" last="Coletti">Thaís M. Coletti</name>
<affiliation wicri:level="4"><nlm:affiliation>Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo</wicri:regionArea>
<placeName><settlement type="city">São Paulo</settlement>
<region type="state">État de São Paulo</region>
</placeName>
<orgName type="university">Université de São Paulo</orgName>
</affiliation>
<affiliation wicri:level="4"><nlm:affiliation>Departamento de Moléstias Infecciosas e Parasitárias, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Departamento de Moléstias Infecciosas e Parasitárias, Faculdade de Medicina da Universidade de São Paulo, São Paulo</wicri:regionArea>
<placeName><settlement type="city">São Paulo</settlement>
<region type="state">État de São Paulo</region>
</placeName>
<orgName type="university">Université de São Paulo</orgName>
</affiliation>
</author>
<author><name sortKey="Da Silva, Camila A M" sort="Da Silva, Camila A M" uniqKey="Da Silva C" first="Camila A M" last="Da Silva">Camila A M. Da Silva</name>
<affiliation wicri:level="4"><nlm:affiliation>Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo</wicri:regionArea>
<placeName><settlement type="city">São Paulo</settlement>
<region type="state">État de São Paulo</region>
</placeName>
<orgName type="university">Université de São Paulo</orgName>
</affiliation>
<affiliation wicri:level="4"><nlm:affiliation>Departamento de Moléstias Infecciosas e Parasitárias, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Departamento de Moléstias Infecciosas e Parasitárias, Faculdade de Medicina da Universidade de São Paulo, São Paulo</wicri:regionArea>
<placeName><settlement type="city">São Paulo</settlement>
<region type="state">État de São Paulo</region>
</placeName>
<orgName type="university">Université de São Paulo</orgName>
</affiliation>
</author>
<author><name sortKey="Ramundo, Mariana S" sort="Ramundo, Mariana S" uniqKey="Ramundo M" first="Mariana S" last="Ramundo">Mariana S. Ramundo</name>
<affiliation wicri:level="4"><nlm:affiliation>Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo</wicri:regionArea>
<placeName><settlement type="city">São Paulo</settlement>
<region type="state">État de São Paulo</region>
</placeName>
<orgName type="university">Université de São Paulo</orgName>
</affiliation>
<affiliation wicri:level="4"><nlm:affiliation>Departamento de Moléstias Infecciosas e Parasitárias, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Departamento de Moléstias Infecciosas e Parasitárias, Faculdade de Medicina da Universidade de São Paulo, São Paulo</wicri:regionArea>
<placeName><settlement type="city">São Paulo</settlement>
<region type="state">État de São Paulo</region>
</placeName>
<orgName type="university">Université de São Paulo</orgName>
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</author>
<author><name sortKey="Amorim, Mariene R" sort="Amorim, Mariene R" uniqKey="Amorim M" first="Mariene R" last="Amorim">Mariene R. Amorim</name>
<affiliation wicri:level="4"><nlm:affiliation>Departamento de Genética, Evolução, Microbiologia e Imunologia, Instituto de Biologia, Universidade Estadual de Campinas, Campinas, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Departamento de Genética, Evolução, Microbiologia e Imunologia, Instituto de Biologia, Universidade Estadual de Campinas, Campinas</wicri:regionArea>
<orgName type="university">Université d'État de Campinas</orgName>
<placeName><settlement type="city">Campinas</settlement>
<region type="state">État de São Paulo</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Hoeltgebaum, Henrique H" sort="Hoeltgebaum, Henrique H" uniqKey="Hoeltgebaum H" first="Henrique H" last="Hoeltgebaum">Henrique H. Hoeltgebaum</name>
<affiliation wicri:level="3"><nlm:affiliation>Department of Mathematics, Imperial College London, London, UK.</nlm:affiliation>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>Department of Mathematics, Imperial College London, London</wicri:regionArea>
<placeName><settlement type="city">Londres</settlement>
<region type="country">Angleterre</region>
<region type="région" nuts="1">Grand Londres</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Mishra, Swapnil" sort="Mishra, Swapnil" uniqKey="Mishra S" first="Swapnil" last="Mishra">Swapnil Mishra</name>
<affiliation wicri:level="3"><nlm:affiliation>MRC Centre for Global Infectious Disease Analysis, J-IDEA, Imperial College London, London, UK.</nlm:affiliation>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>MRC Centre for Global Infectious Disease Analysis, J-IDEA, Imperial College London, London</wicri:regionArea>
<placeName><settlement type="city">Londres</settlement>
<region type="country">Angleterre</region>
<region type="région" nuts="1">Grand Londres</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Gill, Mandev S" sort="Gill, Mandev S" uniqKey="Gill M" first="Mandev S" last="Gill">Mandev S. Gill</name>
<affiliation wicri:level="1"><nlm:affiliation>Department of Microbiology, Immunology and Transplantation, Rega Institute, KU Leuven, Leuven, Belgium.</nlm:affiliation>
<country xml:lang="fr">Belgique</country>
<wicri:regionArea>Department of Microbiology, Immunology and Transplantation, Rega Institute, KU Leuven, Leuven</wicri:regionArea>
<wicri:noRegion>Leuven</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Carvalho, Luiz M" sort="Carvalho, Luiz M" uniqKey="Carvalho L" first="Luiz M" last="Carvalho">Luiz M. Carvalho</name>
<affiliation wicri:level="3"><nlm:affiliation>Escola de Matemática Aplicada (EMAp), Fundação Getúlio Vargas, Rio de Janeiro, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Escola de Matemática Aplicada (EMAp), Fundação Getúlio Vargas, Rio de Janeiro</wicri:regionArea>
<placeName><settlement type="city">Rio de Janeiro</settlement>
<region type="state">État de Rio de Janeiro</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Buss, Lewis F" sort="Buss, Lewis F" uniqKey="Buss L" first="Lewis F" last="Buss">Lewis F. Buss</name>
<affiliation wicri:level="4"><nlm:affiliation>Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo</wicri:regionArea>
<placeName><settlement type="city">São Paulo</settlement>
<region type="state">État de São Paulo</region>
</placeName>
<orgName type="university">Université de São Paulo</orgName>
</affiliation>
</author>
<author><name sortKey="Prete, Carlos A" sort="Prete, Carlos A" uniqKey="Prete C" first="Carlos A" last="Prete">Carlos A. Prete</name>
<affiliation wicri:level="4"><nlm:affiliation>Department of Electronic Systems Engineering, University of São Paulo, São Paulo, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Department of Electronic Systems Engineering, University of São Paulo, São Paulo</wicri:regionArea>
<placeName><settlement type="city">São Paulo</settlement>
<region type="state">État de São Paulo</region>
</placeName>
<orgName type="university">Université de São Paulo</orgName>
</affiliation>
</author>
<author><name sortKey="Ashworth, Jordan" sort="Ashworth, Jordan" uniqKey="Ashworth J" first="Jordan" last="Ashworth">Jordan Ashworth</name>
<affiliation wicri:level="4"><nlm:affiliation>Usher Institute, University of Edinburgh, Edinburgh, UK.</nlm:affiliation>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>Usher Institute, University of Edinburgh, Edinburgh</wicri:regionArea>
<placeName><settlement type="city">Édimbourg</settlement>
<region type="country">Écosse</region>
</placeName>
<orgName type="university">Université d'Édimbourg</orgName>
</affiliation>
</author>
<author><name sortKey="Nakaya, Helder I" sort="Nakaya, Helder I" uniqKey="Nakaya H" first="Helder I" last="Nakaya">Helder I. Nakaya</name>
<affiliation wicri:level="4"><nlm:affiliation>Department of Clinical and Toxicological Analyses, School of Pharmaceutical Sciences, University of São Paulo, São Paulo, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Department of Clinical and Toxicological Analyses, School of Pharmaceutical Sciences, University of São Paulo, São Paulo</wicri:regionArea>
<placeName><settlement type="city">São Paulo</settlement>
<region type="state">État de São Paulo</region>
</placeName>
<orgName type="university">Université de São Paulo</orgName>
</affiliation>
</author>
<author><name sortKey="Peixoto, Pedro S" sort="Peixoto, Pedro S" uniqKey="Peixoto P" first="Pedro S" last="Peixoto">Pedro S. Peixoto</name>
<affiliation wicri:level="4"><nlm:affiliation>Departamento de Matemática Aplicada, Instituto de Matemática e Estatística, Universidade de São Paulo, São Paulo, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Departamento de Matemática Aplicada, Instituto de Matemática e Estatística, Universidade de São Paulo, São Paulo</wicri:regionArea>
<placeName><settlement type="city">São Paulo</settlement>
<region type="state">État de São Paulo</region>
</placeName>
<orgName type="university">Université de São Paulo</orgName>
</affiliation>
</author>
<author><name sortKey="Brady, Oliver J" sort="Brady, Oliver J" uniqKey="Brady O" first="Oliver J" last="Brady">Oliver J. Brady</name>
<affiliation wicri:level="3"><nlm:affiliation>Department of Infectious Disease Epidemiology, Faculty of Epidemiology and Population Health, London School of Hygiene & Tropical Medicine, London, UK.</nlm:affiliation>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>Department of Infectious Disease Epidemiology, Faculty of Epidemiology and Population Health, London School of Hygiene & Tropical Medicine, London</wicri:regionArea>
<placeName><settlement type="city">Londres</settlement>
<region type="country">Angleterre</region>
<region type="région" nuts="1">Grand Londres</region>
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</affiliation>
<affiliation wicri:level="3"><nlm:affiliation>Centre for the Mathematical Modelling of Infectious Diseases, London School of Hygiene & Tropical Medicine, London, UK.</nlm:affiliation>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>Centre for the Mathematical Modelling of Infectious Diseases, London School of Hygiene & Tropical Medicine, London</wicri:regionArea>
<placeName><settlement type="city">Londres</settlement>
<region type="country">Angleterre</region>
<region type="région" nuts="1">Grand Londres</region>
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</affiliation>
</author>
<author><name sortKey="Nicholls, Samuel M" sort="Nicholls, Samuel M" uniqKey="Nicholls S" first="Samuel M" last="Nicholls">Samuel M. Nicholls</name>
<affiliation wicri:level="4"><nlm:affiliation>Institute for Microbiology and Infection, University of Birmingham, Birmingham, UK.</nlm:affiliation>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>Institute for Microbiology and Infection, University of Birmingham, Birmingham</wicri:regionArea>
<placeName><settlement type="city">Birmingham</settlement>
<region type="country">Angleterre</region>
<region type="région" nuts="1">Midlands de l'Ouest</region>
</placeName>
<orgName type="university">Université de Birmingham</orgName>
</affiliation>
</author>
<author><name sortKey="Tanuri, Amilcar" sort="Tanuri, Amilcar" uniqKey="Tanuri A" first="Amilcar" last="Tanuri">Amilcar Tanuri</name>
<affiliation wicri:level="3"><nlm:affiliation>Departamento de Genética, Instituto de Biologia, Universidade Federal do Rio de Janeiro, Rio de Janeiro, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Departamento de Genética, Instituto de Biologia, Universidade Federal do Rio de Janeiro, Rio de Janeiro</wicri:regionArea>
<placeName><settlement type="city">Rio de Janeiro</settlement>
<region type="state">État de Rio de Janeiro</region>
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</author>
<author><name sortKey="Rossi, Atila D" sort="Rossi, Atila D" uniqKey="Rossi A" first="Átila D" last="Rossi">Átila D. Rossi</name>
<affiliation wicri:level="3"><nlm:affiliation>Departamento de Genética, Instituto de Biologia, Universidade Federal do Rio de Janeiro, Rio de Janeiro, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Departamento de Genética, Instituto de Biologia, Universidade Federal do Rio de Janeiro, Rio de Janeiro</wicri:regionArea>
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</affiliation>
</author>
<author><name sortKey="Braga, Carlos K V" sort="Braga, Carlos K V" uniqKey="Braga C" first="Carlos K V" last="Braga">Carlos K V. Braga</name>
<affiliation wicri:level="1"><nlm:affiliation>Institute for Applied Economic Research, Brasília, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Institute for Applied Economic Research, Brasília</wicri:regionArea>
<wicri:noRegion>Brasília</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Gerber, Alexandra L" sort="Gerber, Alexandra L" uniqKey="Gerber A" first="Alexandra L" last="Gerber">Alexandra L. Gerber</name>
<affiliation wicri:level="1"><nlm:affiliation>Laboratório de Bioinformática, Laboratório Nacional de Computação Científica, Petrópolis, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Laboratório de Bioinformática, Laboratório Nacional de Computação Científica, Petrópolis</wicri:regionArea>
<wicri:noRegion>Petrópolis</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="De C Guimaraes, Ana Paula" sort="De C Guimaraes, Ana Paula" uniqKey="De C Guimaraes A" first="Ana Paula" last="De C Guimarães">Ana Paula De C Guimarães</name>
<affiliation wicri:level="1"><nlm:affiliation>Laboratório de Bioinformática, Laboratório Nacional de Computação Científica, Petrópolis, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Laboratório de Bioinformática, Laboratório Nacional de Computação Científica, Petrópolis</wicri:regionArea>
<wicri:noRegion>Petrópolis</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Gaburo, Nelson" sort="Gaburo, Nelson" uniqKey="Gaburo N" first="Nelson" last="Gaburo">Nelson Gaburo</name>
<affiliation wicri:level="3"><nlm:affiliation>DB Diagnósticos do Brasil, São Paulo, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>DB Diagnósticos do Brasil, São Paulo</wicri:regionArea>
<placeName><settlement type="city">São Paulo</settlement>
<region type="state">État de São Paulo</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Alencar, Cecila Salete" sort="Alencar, Cecila Salete" uniqKey="Alencar C" first="Cecila Salete" last="Alencar">Cecila Salete Alencar</name>
<affiliation wicri:level="4"><nlm:affiliation>LIM 03 Laboratório de Medicina Laboratorial, Hospital das Clínicas Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>LIM 03 Laboratório de Medicina Laboratorial, Hospital das Clínicas Faculdade de Medicina da Universidade de São Paulo, São Paulo</wicri:regionArea>
<placeName><settlement type="city">São Paulo</settlement>
<region type="state">État de São Paulo</region>
</placeName>
<orgName type="university">Université de São Paulo</orgName>
</affiliation>
</author>
<author><name sortKey="Ferreira, Alessandro C S" sort="Ferreira, Alessandro C S" uniqKey="Ferreira A" first="Alessandro C S" last="Ferreira">Alessandro C S. Ferreira</name>
<affiliation wicri:level="3"><nlm:affiliation>Instituto Hermes Pardini, Belo Horizonte, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Instituto Hermes Pardini, Belo Horizonte</wicri:regionArea>
<placeName><settlement type="city">Belo Horizonte</settlement>
<region type="state">Minas Gerais</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Lima, Cristiano X" sort="Lima, Cristiano X" uniqKey="Lima C" first="Cristiano X" last="Lima">Cristiano X. Lima</name>
<affiliation wicri:level="4"><nlm:affiliation>Departamento de Cirurgia, Faculdade de Medicina, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Departamento de Cirurgia, Faculdade de Medicina, Universidade Federal de Minas Gerais, Belo Horizonte</wicri:regionArea>
<placeName><settlement type="city">Belo Horizonte</settlement>
<region type="state">Minas Gerais</region>
</placeName>
<orgName type="university">Université fédérale du Minas Gerais</orgName>
</affiliation>
<affiliation wicri:level="3"><nlm:affiliation>Simile Instituto de Imunologia Aplicada Ltda, Belo Horizonte, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Simile Instituto de Imunologia Aplicada Ltda, Belo Horizonte</wicri:regionArea>
<placeName><settlement type="city">Belo Horizonte</settlement>
<region type="state">Minas Gerais</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Levi, Jose Eduardo" sort="Levi, Jose Eduardo" uniqKey="Levi J" first="José Eduardo" last="Levi">José Eduardo Levi</name>
<affiliation wicri:level="3"><nlm:affiliation>Laboratório DASA, São Paulo, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Laboratório DASA, São Paulo</wicri:regionArea>
<placeName><settlement type="city">São Paulo</settlement>
<region type="state">État de São Paulo</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Granato, Celso" sort="Granato, Celso" uniqKey="Granato C" first="Celso" last="Granato">Celso Granato</name>
<affiliation wicri:level="3"><nlm:affiliation>Laboratório Fleury, São Paulo, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Laboratório Fleury, São Paulo</wicri:regionArea>
<placeName><settlement type="city">São Paulo</settlement>
<region type="state">État de São Paulo</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Ferreira, Giulia M" sort="Ferreira, Giulia M" uniqKey="Ferreira G" first="Giulia M" last="Ferreira">Giulia M. Ferreira</name>
<affiliation wicri:level="1"><nlm:affiliation>Laboratório de Virologia, Instituto de Ciências Biomédicas, Universidade Federal de Uberlândia, Uberlândia, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Laboratório de Virologia, Instituto de Ciências Biomédicas, Universidade Federal de Uberlândia, Uberlândia</wicri:regionArea>
<wicri:noRegion>Uberlândia</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Francisco, Ronaldo S" sort="Francisco, Ronaldo S" uniqKey="Francisco R" first="Ronaldo S" last="Francisco">Ronaldo S. Francisco</name>
<affiliation wicri:level="1"><nlm:affiliation>Laboratório de Bioinformática, Laboratório Nacional de Computação Científica, Petrópolis, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Laboratório de Bioinformática, Laboratório Nacional de Computação Científica, Petrópolis</wicri:regionArea>
<wicri:noRegion>Petrópolis</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Granja, Fabiana" sort="Granja, Fabiana" uniqKey="Granja F" first="Fabiana" last="Granja">Fabiana Granja</name>
<affiliation wicri:level="4"><nlm:affiliation>Departamento de Genética, Evolução, Microbiologia e Imunologia, Instituto de Biologia, Universidade Estadual de Campinas, Campinas, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Departamento de Genética, Evolução, Microbiologia e Imunologia, Instituto de Biologia, Universidade Estadual de Campinas, Campinas</wicri:regionArea>
<orgName type="university">Université d'État de Campinas</orgName>
<placeName><settlement type="city">Campinas</settlement>
<region type="state">État de São Paulo</region>
</placeName>
</affiliation>
<affiliation wicri:level="1"><nlm:affiliation>Centro de Estudos da Biodiversidade, Universidade Federal de Roraima, Boa Vista, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Centro de Estudos da Biodiversidade, Universidade Federal de Roraima, Boa Vista</wicri:regionArea>
<wicri:noRegion>Boa Vista</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Garcia, Marcia T" sort="Garcia, Marcia T" uniqKey="Garcia M" first="Marcia T" last="Garcia">Marcia T. Garcia</name>
<affiliation wicri:level="4"><nlm:affiliation>Divisão de Doenças Infecciosas, Faculdade de Ciências Médicas, Universidade Estadual de Campinas, Campinas, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Divisão de Doenças Infecciosas, Faculdade de Ciências Médicas, Universidade Estadual de Campinas, Campinas</wicri:regionArea>
<orgName type="university">Université d'État de Campinas</orgName>
<placeName><settlement type="city">Campinas</settlement>
<region type="state">État de São Paulo</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Moretti, Maria Luiza" sort="Moretti, Maria Luiza" uniqKey="Moretti M" first="Maria Luiza" last="Moretti">Maria Luiza Moretti</name>
<affiliation wicri:level="4"><nlm:affiliation>Divisão de Doenças Infecciosas, Faculdade de Ciências Médicas, Universidade Estadual de Campinas, Campinas, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Divisão de Doenças Infecciosas, Faculdade de Ciências Médicas, Universidade Estadual de Campinas, Campinas</wicri:regionArea>
<orgName type="university">Université d'État de Campinas</orgName>
<placeName><settlement type="city">Campinas</settlement>
<region type="state">État de São Paulo</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Perroud, Mauricio W" sort="Perroud, Mauricio W" uniqKey="Perroud M" first="Mauricio W" last="Perroud">Mauricio W. Perroud</name>
<affiliation wicri:level="4"><nlm:affiliation>Hospital Estadual Sumaré, Universidade Estadual de Campinas, Campinas, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Hospital Estadual Sumaré, Universidade Estadual de Campinas, Campinas</wicri:regionArea>
<orgName type="university">Université d'État de Campinas</orgName>
<placeName><settlement type="city">Campinas</settlement>
<region type="state">État de São Paulo</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Casti Eiras, Terezinha M P P" sort="Casti Eiras, Terezinha M P P" uniqKey="Casti Eiras T" first="Terezinha M P P" last="Casti Eiras">Terezinha M P P. Casti Eiras</name>
<affiliation wicri:level="3"><nlm:affiliation>Departamento de Doenças Infecciosas e Parasitárias, Faculdade de Medicina, Universidade Federal do Rio de Janeiro, Rio de Janeiro, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Departamento de Doenças Infecciosas e Parasitárias, Faculdade de Medicina, Universidade Federal do Rio de Janeiro, Rio de Janeiro</wicri:regionArea>
<placeName><settlement type="city">Rio de Janeiro</settlement>
<region type="state">État de Rio de Janeiro</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Lazari, Carolina S" sort="Lazari, Carolina S" uniqKey="Lazari C" first="Carolina S" last="Lazari">Carolina S. Lazari</name>
<affiliation wicri:level="4"><nlm:affiliation>Divisão de Laboratório Central do Hospital das Clínicas, da Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Divisão de Laboratório Central do Hospital das Clínicas, da Faculdade de Medicina da Universidade de São Paulo, São Paulo</wicri:regionArea>
<placeName><settlement type="city">São Paulo</settlement>
<region type="state">État de São Paulo</region>
</placeName>
<orgName type="university">Université de São Paulo</orgName>
</affiliation>
</author>
<author><name sortKey="Hill, Sarah C" sort="Hill, Sarah C" uniqKey="Hill S" first="Sarah C" last="Hill">Sarah C. Hill</name>
<affiliation wicri:level="4"><nlm:affiliation>Department of Zoology, University of Oxford, Oxford, UK.</nlm:affiliation>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>Department of Zoology, University of Oxford, Oxford</wicri:regionArea>
<placeName><settlement type="city">Oxford</settlement>
<region type="country">Angleterre</region>
<region type="comté" nuts="2">Oxfordshire</region>
</placeName>
<orgName type="university">Université d'Oxford</orgName>
</affiliation>
<affiliation wicri:level="1"><nlm:affiliation>Department of Pathobiology and Population Sciences, Royal Veterinary College, Hatfield, UK.</nlm:affiliation>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>Department of Pathobiology and Population Sciences, Royal Veterinary College, Hatfield</wicri:regionArea>
<wicri:noRegion>Hatfield</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="De Souza Santos, Andreza Aruska" sort="De Souza Santos, Andreza Aruska" uniqKey="De Souza Santos A" first="Andreza Aruska" last="De Souza Santos">Andreza Aruska De Souza Santos</name>
<affiliation wicri:level="4"><nlm:affiliation>University of Oxford, Latin American Centre, Oxford School of Global and Area Studies, Oxford, UK.</nlm:affiliation>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>University of Oxford, Latin American Centre, Oxford School of Global and Area Studies, Oxford</wicri:regionArea>
<placeName><settlement type="city">Oxford</settlement>
<region type="country">Angleterre</region>
<region type="comté" nuts="2">Oxfordshire</region>
</placeName>
<orgName type="university">Université d'Oxford</orgName>
</affiliation>
</author>
<author><name sortKey="Simeoni, Camila L" sort="Simeoni, Camila L" uniqKey="Simeoni C" first="Camila L" last="Simeoni">Camila L. Simeoni</name>
<affiliation wicri:level="4"><nlm:affiliation>Departamento de Genética, Evolução, Microbiologia e Imunologia, Instituto de Biologia, Universidade Estadual de Campinas, Campinas, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Departamento de Genética, Evolução, Microbiologia e Imunologia, Instituto de Biologia, Universidade Estadual de Campinas, Campinas</wicri:regionArea>
<orgName type="university">Université d'État de Campinas</orgName>
<placeName><settlement type="city">Campinas</settlement>
<region type="state">État de São Paulo</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Forato, Julia" sort="Forato, Julia" uniqKey="Forato J" first="Julia" last="Forato">Julia Forato</name>
<affiliation wicri:level="4"><nlm:affiliation>Departamento de Genética, Evolução, Microbiologia e Imunologia, Instituto de Biologia, Universidade Estadual de Campinas, Campinas, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Departamento de Genética, Evolução, Microbiologia e Imunologia, Instituto de Biologia, Universidade Estadual de Campinas, Campinas</wicri:regionArea>
<orgName type="university">Université d'État de Campinas</orgName>
<placeName><settlement type="city">Campinas</settlement>
<region type="state">État de São Paulo</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Sposito, Andrei C" sort="Sposito, Andrei C" uniqKey="Sposito A" first="Andrei C" last="Sposito">Andrei C. Sposito</name>
<affiliation wicri:level="4"><nlm:affiliation>Departamento de Clínica Médica, Faculdade de Ciências Médicas, Universidade Estadual de Campinas, Campinas, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Departamento de Clínica Médica, Faculdade de Ciências Médicas, Universidade Estadual de Campinas, Campinas</wicri:regionArea>
<orgName type="university">Université d'État de Campinas</orgName>
<placeName><settlement type="city">Campinas</settlement>
<region type="state">État de São Paulo</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Schreiber, Angelica Z" sort="Schreiber, Angelica Z" uniqKey="Schreiber A" first="Angelica Z" last="Schreiber">Angelica Z. Schreiber</name>
<affiliation wicri:level="4"><nlm:affiliation>Departamento de Patologia Clínica, Faculdade de Ciências Médicas, Universidade Estadual de Campinas, Campinas, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Departamento de Patologia Clínica, Faculdade de Ciências Médicas, Universidade Estadual de Campinas, Campinas</wicri:regionArea>
<orgName type="university">Université d'État de Campinas</orgName>
<placeName><settlement type="city">Campinas</settlement>
<region type="state">État de São Paulo</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Santos, Magnun N N" sort="Santos, Magnun N N" uniqKey="Santos M" first="Magnun N N" last="Santos">Magnun N N. Santos</name>
<affiliation wicri:level="4"><nlm:affiliation>Departamento de Patologia Clínica, Faculdade de Ciências Médicas, Universidade Estadual de Campinas, Campinas, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Departamento de Patologia Clínica, Faculdade de Ciências Médicas, Universidade Estadual de Campinas, Campinas</wicri:regionArea>
<orgName type="university">Université d'État de Campinas</orgName>
<placeName><settlement type="city">Campinas</settlement>
<region type="state">État de São Paulo</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="De Sa, Camila Zolini" sort="De Sa, Camila Zolini" uniqKey="De Sa C" first="Camila Zolini" last="De Sá">Camila Zolini De Sá</name>
<affiliation wicri:level="4"><nlm:affiliation>Departamento de Genética, Ecologia e Evolução, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Departamento de Genética, Ecologia e Evolução, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte</wicri:regionArea>
<placeName><settlement type="city">Belo Horizonte</settlement>
<region type="state">Minas Gerais</region>
</placeName>
<orgName type="university">Université fédérale du Minas Gerais</orgName>
</affiliation>
</author>
<author><name sortKey="Souza, Renan P" sort="Souza, Renan P" uniqKey="Souza R" first="Renan P" last="Souza">Renan P. Souza</name>
<affiliation wicri:level="4"><nlm:affiliation>Departamento de Genética, Ecologia e Evolução, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Departamento de Genética, Ecologia e Evolução, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte</wicri:regionArea>
<placeName><settlement type="city">Belo Horizonte</settlement>
<region type="state">Minas Gerais</region>
</placeName>
<orgName type="university">Université fédérale du Minas Gerais</orgName>
</affiliation>
</author>
<author><name sortKey="Resende Moreira, Luciana C" sort="Resende Moreira, Luciana C" uniqKey="Resende Moreira L" first="Luciana C" last="Resende-Moreira">Luciana C. Resende-Moreira</name>
<affiliation wicri:level="4"><nlm:affiliation>Departamento de Botânica, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Departamento de Botânica, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte</wicri:regionArea>
<placeName><settlement type="city">Belo Horizonte</settlement>
<region type="state">Minas Gerais</region>
</placeName>
<orgName type="university">Université fédérale du Minas Gerais</orgName>
</affiliation>
</author>
<author><name sortKey="Teixeira, Mauro M" sort="Teixeira, Mauro M" uniqKey="Teixeira M" first="Mauro M" last="Teixeira">Mauro M. Teixeira</name>
<affiliation wicri:level="4"><nlm:affiliation>Departamento de Bioquímica e Imunologia, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Departamento de Bioquímica e Imunologia, Universidade Federal de Minas Gerais, Belo Horizonte</wicri:regionArea>
<placeName><settlement type="city">Belo Horizonte</settlement>
<region type="state">Minas Gerais</region>
</placeName>
<orgName type="university">Université fédérale du Minas Gerais</orgName>
</affiliation>
</author>
<author><name sortKey="Hubner, Josy" sort="Hubner, Josy" uniqKey="Hubner J" first="Josy" last="Hubner">Josy Hubner</name>
<affiliation wicri:level="4"><nlm:affiliation>Departamento de Biologia Celular, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Departamento de Biologia Celular, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte</wicri:regionArea>
<placeName><settlement type="city">Belo Horizonte</settlement>
<region type="state">Minas Gerais</region>
</placeName>
<orgName type="university">Université fédérale du Minas Gerais</orgName>
</affiliation>
</author>
<author><name sortKey="Leme, Patricia A F" sort="Leme, Patricia A F" uniqKey="Leme P" first="Patricia A F" last="Leme">Patricia A F. Leme</name>
<affiliation wicri:level="4"><nlm:affiliation>Centro de Saúde da Comunidade, Universidade Estadual de Campinas, Campinas, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Centro de Saúde da Comunidade, Universidade Estadual de Campinas, Campinas</wicri:regionArea>
<orgName type="university">Université d'État de Campinas</orgName>
<placeName><settlement type="city">Campinas</settlement>
<region type="state">État de São Paulo</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Moreira, Rennan G" sort="Moreira, Rennan G" uniqKey="Moreira R" first="Rennan G" last="Moreira">Rennan G. Moreira</name>
<affiliation wicri:level="4"><nlm:affiliation>Centro de Laboratórios Multiusuários, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Centro de Laboratórios Multiusuários, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte</wicri:regionArea>
<placeName><settlement type="city">Belo Horizonte</settlement>
<region type="state">Minas Gerais</region>
</placeName>
<orgName type="university">Université fédérale du Minas Gerais</orgName>
</affiliation>
</author>
<author><name sortKey="Nogueira, Mauricio L" sort="Nogueira, Mauricio L" uniqKey="Nogueira M" first="Maurício L" last="Nogueira">Maurício L. Nogueira</name>
<affiliation wicri:level="3"><nlm:affiliation>Laboratório de Pesquisas em Virologia, Faculdade de Medicina de São José do Rio Preto, São José do Rio Preto, São Paulo, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Laboratório de Pesquisas em Virologia, Faculdade de Medicina de São José do Rio Preto, São José do Rio Preto, São Paulo</wicri:regionArea>
<placeName><settlement type="city">São Paulo</settlement>
<region type="state">État de São Paulo</region>
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</affiliation>
</author>
<author><name sortKey="Ferguson, Neil M" sort="Ferguson, Neil M" uniqKey="Ferguson N" first="Neil M" last="Ferguson">Neil M. Ferguson</name>
<affiliation wicri:level="3"><nlm:affiliation>MRC Centre for Global Infectious Disease Analysis, J-IDEA, Imperial College London, London, UK.</nlm:affiliation>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>MRC Centre for Global Infectious Disease Analysis, J-IDEA, Imperial College London, London</wicri:regionArea>
<placeName><settlement type="city">Londres</settlement>
<region type="country">Angleterre</region>
<region type="région" nuts="1">Grand Londres</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Costa, Silvia F" sort="Costa, Silvia F" uniqKey="Costa S" first="Silvia F" last="Costa">Silvia F. Costa</name>
<affiliation wicri:level="4"><nlm:affiliation>Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo</wicri:regionArea>
<placeName><settlement type="city">São Paulo</settlement>
<region type="state">État de São Paulo</region>
</placeName>
<orgName type="university">Université de São Paulo</orgName>
</affiliation>
<affiliation wicri:level="4"><nlm:affiliation>Departamento de Moléstias Infecciosas e Parasitárias, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Departamento de Moléstias Infecciosas e Parasitárias, Faculdade de Medicina da Universidade de São Paulo, São Paulo</wicri:regionArea>
<placeName><settlement type="city">São Paulo</settlement>
<region type="state">État de São Paulo</region>
</placeName>
<orgName type="university">Université de São Paulo</orgName>
</affiliation>
</author>
<author><name sortKey="Proenca Modena, Jose Luiz" sort="Proenca Modena, Jose Luiz" uniqKey="Proenca Modena J" first="José Luiz" last="Proenca-Modena">José Luiz Proenca-Modena</name>
<affiliation wicri:level="4"><nlm:affiliation>Departamento de Genética, Evolução, Microbiologia e Imunologia, Instituto de Biologia, Universidade Estadual de Campinas, Campinas, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Departamento de Genética, Evolução, Microbiologia e Imunologia, Instituto de Biologia, Universidade Estadual de Campinas, Campinas</wicri:regionArea>
<orgName type="university">Université d'État de Campinas</orgName>
<placeName><settlement type="city">Campinas</settlement>
<region type="state">État de São Paulo</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Vasconcelos, Ana Tereza R" sort="Vasconcelos, Ana Tereza R" uniqKey="Vasconcelos A" first="Ana Tereza R" last="Vasconcelos">Ana Tereza R. Vasconcelos</name>
<affiliation wicri:level="1"><nlm:affiliation>Laboratório de Bioinformática, Laboratório Nacional de Computação Científica, Petrópolis, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Laboratório de Bioinformática, Laboratório Nacional de Computação Científica, Petrópolis</wicri:regionArea>
<wicri:noRegion>Petrópolis</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Bhatt, Samir" sort="Bhatt, Samir" uniqKey="Bhatt S" first="Samir" last="Bhatt">Samir Bhatt</name>
<affiliation wicri:level="3"><nlm:affiliation>MRC Centre for Global Infectious Disease Analysis, J-IDEA, Imperial College London, London, UK.</nlm:affiliation>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>MRC Centre for Global Infectious Disease Analysis, J-IDEA, Imperial College London, London</wicri:regionArea>
<placeName><settlement type="city">Londres</settlement>
<region type="country">Angleterre</region>
<region type="région" nuts="1">Grand Londres</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Lemey, Philippe" sort="Lemey, Philippe" uniqKey="Lemey P" first="Philippe" last="Lemey">Philippe Lemey</name>
<affiliation wicri:level="1"><nlm:affiliation>Department of Microbiology, Immunology and Transplantation, Rega Institute, KU Leuven, Leuven, Belgium.</nlm:affiliation>
<country xml:lang="fr">Belgique</country>
<wicri:regionArea>Department of Microbiology, Immunology and Transplantation, Rega Institute, KU Leuven, Leuven</wicri:regionArea>
<wicri:noRegion>Leuven</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Wu, Chieh Hsi" sort="Wu, Chieh Hsi" uniqKey="Wu C" first="Chieh-Hsi" last="Wu">Chieh-Hsi Wu</name>
<affiliation wicri:level="1"><nlm:affiliation>Mathematical Sciences, University of Southampton, Southampton, UK.</nlm:affiliation>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>Mathematical Sciences, University of Southampton, Southampton</wicri:regionArea>
<wicri:noRegion>Southampton</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Rambaut, Andrew" sort="Rambaut, Andrew" uniqKey="Rambaut A" first="Andrew" last="Rambaut">Andrew Rambaut</name>
<affiliation wicri:level="4"><nlm:affiliation>Institute of Evolutionary Biology, University of Edinburgh, Edinburgh, UK.</nlm:affiliation>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>Institute of Evolutionary Biology, University of Edinburgh, Edinburgh</wicri:regionArea>
<placeName><settlement type="city">Édimbourg</settlement>
<region type="country">Écosse</region>
</placeName>
<orgName type="university">Université d'Édimbourg</orgName>
</affiliation>
</author>
<author><name sortKey="Loman, Nick J" sort="Loman, Nick J" uniqKey="Loman N" first="Nick J" last="Loman">Nick J. Loman</name>
<affiliation wicri:level="4"><nlm:affiliation>Institute for Microbiology and Infection, University of Birmingham, Birmingham, UK.</nlm:affiliation>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>Institute for Microbiology and Infection, University of Birmingham, Birmingham</wicri:regionArea>
<placeName><settlement type="city">Birmingham</settlement>
<region type="country">Angleterre</region>
<region type="région" nuts="1">Midlands de l'Ouest</region>
</placeName>
<orgName type="university">Université de Birmingham</orgName>
</affiliation>
</author>
<author><name sortKey="Aguiar, Renato S" sort="Aguiar, Renato S" uniqKey="Aguiar R" first="Renato S" last="Aguiar">Renato S. Aguiar</name>
<affiliation wicri:level="4"><nlm:affiliation>Departamento de Genética, Ecologia e Evolução, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Departamento de Genética, Ecologia e Evolução, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte</wicri:regionArea>
<placeName><settlement type="city">Belo Horizonte</settlement>
<region type="state">Minas Gerais</region>
</placeName>
<orgName type="university">Université fédérale du Minas Gerais</orgName>
</affiliation>
</author>
<author><name sortKey="Pybus, Oliver G" sort="Pybus, Oliver G" uniqKey="Pybus O" first="Oliver G" last="Pybus">Oliver G. Pybus</name>
<affiliation wicri:level="4"><nlm:affiliation>Department of Zoology, University of Oxford, Oxford, UK.</nlm:affiliation>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>Department of Zoology, University of Oxford, Oxford</wicri:regionArea>
<placeName><settlement type="city">Oxford</settlement>
<region type="country">Angleterre</region>
<region type="comté" nuts="2">Oxfordshire</region>
</placeName>
<orgName type="university">Université d'Oxford</orgName>
</affiliation>
</author>
<author><name sortKey="Sabino, Ester C" sort="Sabino, Ester C" uniqKey="Sabino E" first="Ester C" last="Sabino">Ester C. Sabino</name>
<affiliation wicri:level="4"><nlm:affiliation>Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil. sabinoec@usp.br nfaria@ic.ac.uk.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo</wicri:regionArea>
<placeName><settlement type="city">São Paulo</settlement>
<region type="state">État de São Paulo</region>
</placeName>
<orgName type="university">Université de São Paulo</orgName>
</affiliation>
<affiliation wicri:level="4"><nlm:affiliation>Departamento de Moléstias Infecciosas e Parasitárias, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Departamento de Moléstias Infecciosas e Parasitárias, Faculdade de Medicina da Universidade de São Paulo, São Paulo</wicri:regionArea>
<placeName><settlement type="city">São Paulo</settlement>
<region type="state">État de São Paulo</region>
</placeName>
<orgName type="university">Université de São Paulo</orgName>
</affiliation>
</author>
<author><name sortKey="Faria, Nuno Rodrigues" sort="Faria, Nuno Rodrigues" uniqKey="Faria N" first="Nuno Rodrigues" last="Faria">Nuno Rodrigues Faria</name>
<affiliation wicri:level="4"><nlm:affiliation>Department of Zoology, University of Oxford, Oxford, UK. sabinoec@usp.br nfaria@ic.ac.uk.</nlm:affiliation>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>Department of Zoology, University of Oxford, Oxford</wicri:regionArea>
<placeName><settlement type="city">Oxford</settlement>
<region type="country">Angleterre</region>
<region type="comté" nuts="2">Oxfordshire</region>
</placeName>
<orgName type="university">Université d'Oxford</orgName>
</affiliation>
<affiliation wicri:level="4"><nlm:affiliation>Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</nlm:affiliation>
<country xml:lang="fr">Brésil</country>
<wicri:regionArea>Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo</wicri:regionArea>
<placeName><settlement type="city">São Paulo</settlement>
<region type="state">État de São Paulo</region>
</placeName>
<orgName type="university">Université de São Paulo</orgName>
</affiliation>
<affiliation wicri:level="3"><nlm:affiliation>MRC Centre for Global Infectious Disease Analysis, J-IDEA, Imperial College London, London, UK.</nlm:affiliation>
<country xml:lang="fr">Royaume-Uni</country>
<wicri:regionArea>MRC Centre for Global Infectious Disease Analysis, J-IDEA, Imperial College London, London</wicri:regionArea>
<placeName><settlement type="city">Londres</settlement>
<region type="country">Angleterre</region>
<region type="région" nuts="1">Grand Londres</region>
</placeName>
</affiliation>
</author>
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<series><title level="j">Science (New York, N.Y.)</title>
<idno type="eISSN">1095-9203</idno>
<imprint><date when="2020" type="published">2020</date>
</imprint>
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<profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Basic Reproduction Number (MeSH)</term>
<term>Bayes Theorem (MeSH)</term>
<term>Betacoronavirus (classification)</term>
<term>Betacoronavirus (genetics)</term>
<term>Brazil (epidemiology)</term>
<term>Cities (epidemiology)</term>
<term>Clinical Laboratory Techniques (MeSH)</term>
<term>Coronavirus Infections (diagnosis)</term>
<term>Coronavirus Infections (epidemiology)</term>
<term>Coronavirus Infections (prevention & control)</term>
<term>Coronavirus Infections (transmission)</term>
<term>Coronavirus Infections (virology)</term>
<term>Europe (MeSH)</term>
<term>Evolution, Molecular (MeSH)</term>
<term>Genome, Viral (MeSH)</term>
<term>Humans (MeSH)</term>
<term>Models, Genetic (MeSH)</term>
<term>Models, Statistical (MeSH)</term>
<term>Pandemics (prevention & control)</term>
<term>Phylogeny (MeSH)</term>
<term>Phylogeography (MeSH)</term>
<term>Pneumonia, Viral (epidemiology)</term>
<term>Pneumonia, Viral (prevention & control)</term>
<term>Pneumonia, Viral (transmission)</term>
<term>Pneumonia, Viral (virology)</term>
<term>Spatio-Temporal Analysis (MeSH)</term>
<term>Travel (MeSH)</term>
<term>Urban Population (MeSH)</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr"><term>Analyse spatio-temporelle (MeSH)</term>
<term>Betacoronavirus (classification)</term>
<term>Betacoronavirus (génétique)</term>
<term>Brésil (épidémiologie)</term>
<term>Europe (MeSH)</term>
<term>Génome viral (MeSH)</term>
<term>Humains (MeSH)</term>
<term>Infections à coronavirus (diagnostic)</term>
<term>Infections à coronavirus (prévention et contrôle)</term>
<term>Infections à coronavirus (transmission)</term>
<term>Infections à coronavirus (virologie)</term>
<term>Infections à coronavirus (épidémiologie)</term>
<term>Modèles génétiques (MeSH)</term>
<term>Modèles statistiques (MeSH)</term>
<term>Pandémies (prévention et contrôle)</term>
<term>Phylogenèse (MeSH)</term>
<term>Phylogéographie (MeSH)</term>
<term>Pneumopathie virale (prévention et contrôle)</term>
<term>Pneumopathie virale (transmission)</term>
<term>Pneumopathie virale (virologie)</term>
<term>Pneumopathie virale (épidémiologie)</term>
<term>Population urbaine (MeSH)</term>
<term>Taux de reproduction de base (MeSH)</term>
<term>Techniques de laboratoire clinique (MeSH)</term>
<term>Théorème de Bayes (MeSH)</term>
<term>Villes (épidémiologie)</term>
<term>Voyage (MeSH)</term>
<term>Évolution moléculaire (MeSH)</term>
</keywords>
<keywords scheme="MESH" type="geographic" qualifier="epidemiology" xml:lang="en"><term>Brazil</term>
<term>Cities</term>
</keywords>
<keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>Betacoronavirus</term>
</keywords>
<keywords scheme="MESH" qualifier="diagnosis" xml:lang="en"><term>Coronavirus Infections</term>
</keywords>
<keywords scheme="MESH" qualifier="diagnostic" xml:lang="fr"><term>Infections à coronavirus</term>
</keywords>
<keywords scheme="MESH" qualifier="epidemiology" xml:lang="en"><term>Coronavirus Infections</term>
<term>Pneumonia, Viral</term>
</keywords>
<keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Betacoronavirus</term>
</keywords>
<keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Betacoronavirus</term>
</keywords>
<keywords scheme="MESH" qualifier="prevention & control" xml:lang="en"><term>Coronavirus Infections</term>
<term>Pandemics</term>
<term>Pneumonia, Viral</term>
</keywords>
<keywords scheme="MESH" qualifier="prévention et contrôle" xml:lang="fr"><term>Infections à coronavirus</term>
<term>Pandémies</term>
<term>Pneumopathie virale</term>
</keywords>
<keywords scheme="MESH" qualifier="transmission" xml:lang="en"><term>Coronavirus Infections</term>
<term>Pneumonia, Viral</term>
</keywords>
<keywords scheme="MESH" qualifier="virologie" xml:lang="fr"><term>Infections à coronavirus</term>
<term>Pneumopathie virale</term>
</keywords>
<keywords scheme="MESH" qualifier="virology" xml:lang="en"><term>Coronavirus Infections</term>
<term>Pneumonia, Viral</term>
</keywords>
<keywords scheme="MESH" qualifier="épidémiologie" xml:lang="fr"><term>Betacoronavirus</term>
<term>Brésil</term>
<term>Infections à coronavirus</term>
<term>Pneumopathie virale</term>
<term>Villes</term>
</keywords>
<keywords scheme="MESH" xml:lang="en"><term>Basic Reproduction Number</term>
<term>Bayes Theorem</term>
<term>Clinical Laboratory Techniques</term>
<term>Europe</term>
<term>Evolution, Molecular</term>
<term>Genome, Viral</term>
<term>Humans</term>
<term>Models, Genetic</term>
<term>Models, Statistical</term>
<term>Phylogeny</term>
<term>Phylogeography</term>
<term>Spatio-Temporal Analysis</term>
<term>Travel</term>
<term>Urban Population</term>
</keywords>
<keywords scheme="MESH" xml:lang="fr"><term>Analyse spatio-temporelle</term>
<term>Europe</term>
<term>Génome viral</term>
<term>Humains</term>
<term>Modèles génétiques</term>
<term>Modèles statistiques</term>
<term>Phylogenèse</term>
<term>Phylogéographie</term>
<term>Population urbaine</term>
<term>Taux de reproduction de base</term>
<term>Techniques de laboratoire clinique</term>
<term>Théorème de Bayes</term>
<term>Voyage</term>
<term>Évolution moléculaire</term>
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<front><div type="abstract" xml:lang="en">Brazil currently has one of the fastest-growing severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) epidemics in the world. Because of limited available data, assessments of the impact of nonpharmaceutical interventions (NPIs) on this virus spread remain challenging. Using a mobility-driven transmission model, we show that NPIs reduced the reproduction number from >3 to 1 to 1.6 in São Paulo and Rio de Janeiro. Sequencing of 427 new genomes and analysis of a geographically representative genomic dataset identified >100 international virus introductions in Brazil. We estimate that most (76%) of the Brazilian strains fell in three clades that were introduced from Europe between 22 February and 11 March 2020. During the early epidemic phase, we found that SARS-CoV-2 spread mostly locally and within state borders. After this period, despite sharp decreases in air travel, we estimated multiple exportations from large urban centers that coincided with a 25% increase in average traveled distances in national flights. This study sheds new light on the epidemic transmission and evolutionary trajectories of SARS-CoV-2 lineages in Brazil and provides evidence that current interventions remain insufficient to keep virus transmission under control in this country.</div>
</front>
</TEI>
<pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">32703910</PMID>
<DateCompleted><Year>2020</Year>
<Month>09</Month>
<Day>18</Day>
</DateCompleted>
<DateRevised><Year>2020</Year>
<Month>09</Month>
<Day>18</Day>
</DateRevised>
<Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1095-9203</ISSN>
<JournalIssue CitedMedium="Internet"><Volume>369</Volume>
<Issue>6508</Issue>
<PubDate><Year>2020</Year>
<Month>09</Month>
<Day>04</Day>
</PubDate>
</JournalIssue>
<Title>Science (New York, N.Y.)</Title>
<ISOAbbreviation>Science</ISOAbbreviation>
</Journal>
<ArticleTitle>Evolution and epidemic spread of SARS-CoV-2 in Brazil.</ArticleTitle>
<Pagination><MedlinePgn>1255-1260</MedlinePgn>
</Pagination>
<ELocationID EIdType="doi" ValidYN="Y">10.1126/science.abd2161</ELocationID>
<Abstract><AbstractText>Brazil currently has one of the fastest-growing severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) epidemics in the world. Because of limited available data, assessments of the impact of nonpharmaceutical interventions (NPIs) on this virus spread remain challenging. Using a mobility-driven transmission model, we show that NPIs reduced the reproduction number from >3 to 1 to 1.6 in São Paulo and Rio de Janeiro. Sequencing of 427 new genomes and analysis of a geographically representative genomic dataset identified >100 international virus introductions in Brazil. We estimate that most (76%) of the Brazilian strains fell in three clades that were introduced from Europe between 22 February and 11 March 2020. During the early epidemic phase, we found that SARS-CoV-2 spread mostly locally and within state borders. After this period, despite sharp decreases in air travel, we estimated multiple exportations from large urban centers that coincided with a 25% increase in average traveled distances in national flights. This study sheds new light on the epidemic transmission and evolutionary trajectories of SARS-CoV-2 lineages in Brazil and provides evidence that current interventions remain insufficient to keep virus transmission under control in this country.</AbstractText>
<CopyrightInformation>Copyright © 2020 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.</CopyrightInformation>
</Abstract>
<AuthorList CompleteYN="Y"><Author ValidYN="Y" EqualContrib="Y"><LastName>Candido</LastName>
<ForeName>Darlan S</ForeName>
<Initials>DS</Initials>
<Identifier Source="ORCID">0000-0002-5080-3130</Identifier>
<AffiliationInfo><Affiliation>Department of Zoology, University of Oxford, Oxford, UK.</Affiliation>
</AffiliationInfo>
<AffiliationInfo><Affiliation>Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y" EqualContrib="Y"><LastName>Claro</LastName>
<ForeName>Ingra M</ForeName>
<Initials>IM</Initials>
<Identifier Source="ORCID">0000-0001-8637-2910</Identifier>
<AffiliationInfo><Affiliation>Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</Affiliation>
</AffiliationInfo>
<AffiliationInfo><Affiliation>Departamento de Moléstias Infecciosas e Parasitárias, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y" EqualContrib="Y"><LastName>de Jesus</LastName>
<ForeName>Jaqueline G</ForeName>
<Initials>JG</Initials>
<Identifier Source="ORCID">0000-0002-5404-272X</Identifier>
<AffiliationInfo><Affiliation>Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</Affiliation>
</AffiliationInfo>
<AffiliationInfo><Affiliation>Departamento de Moléstias Infecciosas e Parasitárias, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y" EqualContrib="Y"><LastName>Souza</LastName>
<ForeName>William M</ForeName>
<Initials>WM</Initials>
<Identifier Source="ORCID">0000-0002-0025-8293</Identifier>
<AffiliationInfo><Affiliation>Centro de Pesquisa em Virologia, Faculdade de Medicina de Ribeirão Preto, Ribeirão Preto, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y" EqualContrib="Y"><LastName>Moreira</LastName>
<ForeName>Filipe R R</ForeName>
<Initials>FRR</Initials>
<Identifier Source="ORCID">0000-0002-7162-5070</Identifier>
<AffiliationInfo><Affiliation>Departamento de Genética, Instituto de Biologia, Universidade Federal do Rio de Janeiro, Rio de Janeiro, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y" EqualContrib="Y"><LastName>Dellicour</LastName>
<ForeName>Simon</ForeName>
<Initials>S</Initials>
<Identifier Source="ORCID">0000-0001-9558-1052</Identifier>
<AffiliationInfo><Affiliation>Spatial Epidemiology Lab, Université Libre de Bruxelles, Brussels, Belgium.</Affiliation>
</AffiliationInfo>
<AffiliationInfo><Affiliation>Department of Microbiology, Immunology and Transplantation, Rega Institute, KU Leuven, Leuven, Belgium.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y" EqualContrib="Y"><LastName>Mellan</LastName>
<ForeName>Thomas A</ForeName>
<Initials>TA</Initials>
<Identifier Source="ORCID">0000-0003-4185-9930</Identifier>
<AffiliationInfo><Affiliation>MRC Centre for Global Infectious Disease Analysis, J-IDEA, Imperial College London, London, UK.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>du Plessis</LastName>
<ForeName>Louis</ForeName>
<Initials>L</Initials>
<Identifier Source="ORCID">0000-0003-0352-6289</Identifier>
<AffiliationInfo><Affiliation>Department of Zoology, University of Oxford, Oxford, UK.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Pereira</LastName>
<ForeName>Rafael H M</ForeName>
<Initials>RHM</Initials>
<Identifier Source="ORCID">0000-0003-2125-7465</Identifier>
<AffiliationInfo><Affiliation>Institute for Applied Economic Research, Brasília, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Sales</LastName>
<ForeName>Flavia C S</ForeName>
<Initials>FCS</Initials>
<Identifier Source="ORCID">0000-0002-9048-0030</Identifier>
<AffiliationInfo><Affiliation>Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</Affiliation>
</AffiliationInfo>
<AffiliationInfo><Affiliation>Departamento de Moléstias Infecciosas e Parasitárias, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Manuli</LastName>
<ForeName>Erika R</ForeName>
<Initials>ER</Initials>
<Identifier Source="ORCID">0000-0003-2376-8488</Identifier>
<AffiliationInfo><Affiliation>Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</Affiliation>
</AffiliationInfo>
<AffiliationInfo><Affiliation>Departamento de Moléstias Infecciosas e Parasitárias, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Thézé</LastName>
<ForeName>Julien</ForeName>
<Initials>J</Initials>
<Identifier Source="ORCID">0000-0001-8188-9494</Identifier>
<AffiliationInfo><Affiliation>Université Clermont Auvergne, INRAE, VetAgro Sup, UMR EPIA, Saint-Genès-Champanelle, France.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Almeida</LastName>
<ForeName>Luiz</ForeName>
<Initials>L</Initials>
<Identifier Source="ORCID">0000-0002-7124-2715</Identifier>
<AffiliationInfo><Affiliation>Laboratório de Bioinformática, Laboratório Nacional de Computação Científica, Petrópolis, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Menezes</LastName>
<ForeName>Mariane T</ForeName>
<Initials>MT</Initials>
<Identifier Source="ORCID">0000-0002-1042-2990</Identifier>
<AffiliationInfo><Affiliation>Departamento de Genética, Instituto de Biologia, Universidade Federal do Rio de Janeiro, Rio de Janeiro, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Voloch</LastName>
<ForeName>Carolina M</ForeName>
<Initials>CM</Initials>
<Identifier Source="ORCID">0000-0001-5182-4366</Identifier>
<AffiliationInfo><Affiliation>Departamento de Genética, Instituto de Biologia, Universidade Federal do Rio de Janeiro, Rio de Janeiro, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Fumagalli</LastName>
<ForeName>Marcilio J</ForeName>
<Initials>MJ</Initials>
<Identifier Source="ORCID">0000-0002-0207-5423</Identifier>
<AffiliationInfo><Affiliation>Centro de Pesquisa em Virologia, Faculdade de Medicina de Ribeirão Preto, Ribeirão Preto, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Coletti</LastName>
<ForeName>Thaís M</ForeName>
<Initials>TM</Initials>
<Identifier Source="ORCID">0000-0003-1693-7984</Identifier>
<AffiliationInfo><Affiliation>Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</Affiliation>
</AffiliationInfo>
<AffiliationInfo><Affiliation>Departamento de Moléstias Infecciosas e Parasitárias, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>da Silva</LastName>
<ForeName>Camila A M</ForeName>
<Initials>CAM</Initials>
<Identifier Source="ORCID">0000-0002-4298-6782</Identifier>
<AffiliationInfo><Affiliation>Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</Affiliation>
</AffiliationInfo>
<AffiliationInfo><Affiliation>Departamento de Moléstias Infecciosas e Parasitárias, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Ramundo</LastName>
<ForeName>Mariana S</ForeName>
<Initials>MS</Initials>
<Identifier Source="ORCID">0000-0002-0650-4985</Identifier>
<AffiliationInfo><Affiliation>Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</Affiliation>
</AffiliationInfo>
<AffiliationInfo><Affiliation>Departamento de Moléstias Infecciosas e Parasitárias, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Amorim</LastName>
<ForeName>Mariene R</ForeName>
<Initials>MR</Initials>
<Identifier Source="ORCID">0000-0002-8516-0155</Identifier>
<AffiliationInfo><Affiliation>Departamento de Genética, Evolução, Microbiologia e Imunologia, Instituto de Biologia, Universidade Estadual de Campinas, Campinas, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Hoeltgebaum</LastName>
<ForeName>Henrique H</ForeName>
<Initials>HH</Initials>
<Identifier Source="ORCID">0000-0001-9561-5478</Identifier>
<AffiliationInfo><Affiliation>Department of Mathematics, Imperial College London, London, UK.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Mishra</LastName>
<ForeName>Swapnil</ForeName>
<Initials>S</Initials>
<Identifier Source="ORCID">0000-0002-8759-5902</Identifier>
<AffiliationInfo><Affiliation>MRC Centre for Global Infectious Disease Analysis, J-IDEA, Imperial College London, London, UK.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Gill</LastName>
<ForeName>Mandev S</ForeName>
<Initials>MS</Initials>
<Identifier Source="ORCID">0000-0001-7818-1081</Identifier>
<AffiliationInfo><Affiliation>Department of Microbiology, Immunology and Transplantation, Rega Institute, KU Leuven, Leuven, Belgium.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Carvalho</LastName>
<ForeName>Luiz M</ForeName>
<Initials>LM</Initials>
<Identifier Source="ORCID">0000-0001-5736-5578</Identifier>
<AffiliationInfo><Affiliation>Escola de Matemática Aplicada (EMAp), Fundação Getúlio Vargas, Rio de Janeiro, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Buss</LastName>
<ForeName>Lewis F</ForeName>
<Initials>LF</Initials>
<Identifier Source="ORCID">0000-0002-9009-9301</Identifier>
<AffiliationInfo><Affiliation>Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Prete</LastName>
<ForeName>Carlos A</ForeName>
<Initials>CA</Initials>
<Suffix>Jr</Suffix>
<Identifier Source="ORCID">0000-0002-3907-423X</Identifier>
<AffiliationInfo><Affiliation>Department of Electronic Systems Engineering, University of São Paulo, São Paulo, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Ashworth</LastName>
<ForeName>Jordan</ForeName>
<Initials>J</Initials>
<Identifier Source="ORCID">0000-0003-1740-7475</Identifier>
<AffiliationInfo><Affiliation>Usher Institute, University of Edinburgh, Edinburgh, UK.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Nakaya</LastName>
<ForeName>Helder I</ForeName>
<Initials>HI</Initials>
<Identifier Source="ORCID">0000-0001-5297-9108</Identifier>
<AffiliationInfo><Affiliation>Department of Clinical and Toxicological Analyses, School of Pharmaceutical Sciences, University of São Paulo, São Paulo, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Peixoto</LastName>
<ForeName>Pedro S</ForeName>
<Initials>PS</Initials>
<Identifier Source="ORCID">0000-0003-2358-3221</Identifier>
<AffiliationInfo><Affiliation>Departamento de Matemática Aplicada, Instituto de Matemática e Estatística, Universidade de São Paulo, São Paulo, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Brady</LastName>
<ForeName>Oliver J</ForeName>
<Initials>OJ</Initials>
<AffiliationInfo><Affiliation>Department of Infectious Disease Epidemiology, Faculty of Epidemiology and Population Health, London School of Hygiene & Tropical Medicine, London, UK.</Affiliation>
</AffiliationInfo>
<AffiliationInfo><Affiliation>Centre for the Mathematical Modelling of Infectious Diseases, London School of Hygiene & Tropical Medicine, London, UK.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Nicholls</LastName>
<ForeName>Samuel M</ForeName>
<Initials>SM</Initials>
<Identifier Source="ORCID">0000-0003-4081-065X</Identifier>
<AffiliationInfo><Affiliation>Institute for Microbiology and Infection, University of Birmingham, Birmingham, UK.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Tanuri</LastName>
<ForeName>Amilcar</ForeName>
<Initials>A</Initials>
<Identifier Source="ORCID">0000-0003-0570-750X</Identifier>
<AffiliationInfo><Affiliation>Departamento de Genética, Instituto de Biologia, Universidade Federal do Rio de Janeiro, Rio de Janeiro, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Rossi</LastName>
<ForeName>Átila D</ForeName>
<Initials>ÁD</Initials>
<Identifier Source="ORCID">0000-0001-6235-8807</Identifier>
<AffiliationInfo><Affiliation>Departamento de Genética, Instituto de Biologia, Universidade Federal do Rio de Janeiro, Rio de Janeiro, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Braga</LastName>
<ForeName>Carlos K V</ForeName>
<Initials>CKV</Initials>
<Identifier Source="ORCID">0000-0002-6104-7297</Identifier>
<AffiliationInfo><Affiliation>Institute for Applied Economic Research, Brasília, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Gerber</LastName>
<ForeName>Alexandra L</ForeName>
<Initials>AL</Initials>
<Identifier Source="ORCID">0000-0001-5724-6106</Identifier>
<AffiliationInfo><Affiliation>Laboratório de Bioinformática, Laboratório Nacional de Computação Científica, Petrópolis, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>de C Guimarães</LastName>
<ForeName>Ana Paula</ForeName>
<Initials>AP</Initials>
<Identifier Source="ORCID">0000-0001-9519-0545</Identifier>
<AffiliationInfo><Affiliation>Laboratório de Bioinformática, Laboratório Nacional de Computação Científica, Petrópolis, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Gaburo</LastName>
<ForeName>Nelson</ForeName>
<Initials>N</Initials>
<Suffix>Jr</Suffix>
<AffiliationInfo><Affiliation>DB Diagnósticos do Brasil, São Paulo, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Alencar</LastName>
<ForeName>Cecila Salete</ForeName>
<Initials>CS</Initials>
<Identifier Source="ORCID">0000-0002-3583-2275</Identifier>
<AffiliationInfo><Affiliation>LIM 03 Laboratório de Medicina Laboratorial, Hospital das Clínicas Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Ferreira</LastName>
<ForeName>Alessandro C S</ForeName>
<Initials>ACS</Initials>
<Identifier Source="ORCID">0000-0001-7711-1014</Identifier>
<AffiliationInfo><Affiliation>Instituto Hermes Pardini, Belo Horizonte, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Lima</LastName>
<ForeName>Cristiano X</ForeName>
<Initials>CX</Initials>
<Identifier Source="ORCID">0000-0001-7724-890X</Identifier>
<AffiliationInfo><Affiliation>Departamento de Cirurgia, Faculdade de Medicina, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil.</Affiliation>
</AffiliationInfo>
<AffiliationInfo><Affiliation>Simile Instituto de Imunologia Aplicada Ltda, Belo Horizonte, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Levi</LastName>
<ForeName>José Eduardo</ForeName>
<Initials>JE</Initials>
<Identifier Source="ORCID">0000-0002-3557-2717</Identifier>
<AffiliationInfo><Affiliation>Laboratório DASA, São Paulo, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Granato</LastName>
<ForeName>Celso</ForeName>
<Initials>C</Initials>
<AffiliationInfo><Affiliation>Laboratório Fleury, São Paulo, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Ferreira</LastName>
<ForeName>Giulia M</ForeName>
<Initials>GM</Initials>
<Identifier Source="ORCID">0000-0003-0444-4592</Identifier>
<AffiliationInfo><Affiliation>Laboratório de Virologia, Instituto de Ciências Biomédicas, Universidade Federal de Uberlândia, Uberlândia, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Francisco</LastName>
<ForeName>Ronaldo S</ForeName>
<Initials>RS</Initials>
<Suffix>Jr</Suffix>
<Identifier Source="ORCID">0000-0001-7419-3907</Identifier>
<AffiliationInfo><Affiliation>Laboratório de Bioinformática, Laboratório Nacional de Computação Científica, Petrópolis, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Granja</LastName>
<ForeName>Fabiana</ForeName>
<Initials>F</Initials>
<Identifier Source="ORCID">0000-0003-3602-8550</Identifier>
<AffiliationInfo><Affiliation>Departamento de Genética, Evolução, Microbiologia e Imunologia, Instituto de Biologia, Universidade Estadual de Campinas, Campinas, Brazil.</Affiliation>
</AffiliationInfo>
<AffiliationInfo><Affiliation>Centro de Estudos da Biodiversidade, Universidade Federal de Roraima, Boa Vista, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Garcia</LastName>
<ForeName>Marcia T</ForeName>
<Initials>MT</Initials>
<Identifier Source="ORCID">0000-0003-3319-115X</Identifier>
<AffiliationInfo><Affiliation>Divisão de Doenças Infecciosas, Faculdade de Ciências Médicas, Universidade Estadual de Campinas, Campinas, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Moretti</LastName>
<ForeName>Maria Luiza</ForeName>
<Initials>ML</Initials>
<AffiliationInfo><Affiliation>Divisão de Doenças Infecciosas, Faculdade de Ciências Médicas, Universidade Estadual de Campinas, Campinas, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Perroud</LastName>
<ForeName>Mauricio W</ForeName>
<Initials>MW</Initials>
<Suffix>Jr</Suffix>
<Identifier Source="ORCID">0000-0001-5984-9947</Identifier>
<AffiliationInfo><Affiliation>Hospital Estadual Sumaré, Universidade Estadual de Campinas, Campinas, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Castiñeiras</LastName>
<ForeName>Terezinha M P P</ForeName>
<Initials>TMPP</Initials>
<Identifier Source="ORCID">0000-0002-4746-6049</Identifier>
<AffiliationInfo><Affiliation>Departamento de Doenças Infecciosas e Parasitárias, Faculdade de Medicina, Universidade Federal do Rio de Janeiro, Rio de Janeiro, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Lazari</LastName>
<ForeName>Carolina S</ForeName>
<Initials>CS</Initials>
<AffiliationInfo><Affiliation>Divisão de Laboratório Central do Hospital das Clínicas, da Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Hill</LastName>
<ForeName>Sarah C</ForeName>
<Initials>SC</Initials>
<AffiliationInfo><Affiliation>Department of Zoology, University of Oxford, Oxford, UK.</Affiliation>
</AffiliationInfo>
<AffiliationInfo><Affiliation>Department of Pathobiology and Population Sciences, Royal Veterinary College, Hatfield, UK.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>de Souza Santos</LastName>
<ForeName>Andreza Aruska</ForeName>
<Initials>AA</Initials>
<AffiliationInfo><Affiliation>University of Oxford, Latin American Centre, Oxford School of Global and Area Studies, Oxford, UK.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Simeoni</LastName>
<ForeName>Camila L</ForeName>
<Initials>CL</Initials>
<Identifier Source="ORCID">0000-0003-2288-5500</Identifier>
<AffiliationInfo><Affiliation>Departamento de Genética, Evolução, Microbiologia e Imunologia, Instituto de Biologia, Universidade Estadual de Campinas, Campinas, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Forato</LastName>
<ForeName>Julia</ForeName>
<Initials>J</Initials>
<Identifier Source="ORCID">0000-0002-6247-9657</Identifier>
<AffiliationInfo><Affiliation>Departamento de Genética, Evolução, Microbiologia e Imunologia, Instituto de Biologia, Universidade Estadual de Campinas, Campinas, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Sposito</LastName>
<ForeName>Andrei C</ForeName>
<Initials>AC</Initials>
<Identifier Source="ORCID">0000-0001-7127-2052</Identifier>
<AffiliationInfo><Affiliation>Departamento de Clínica Médica, Faculdade de Ciências Médicas, Universidade Estadual de Campinas, Campinas, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Schreiber</LastName>
<ForeName>Angelica Z</ForeName>
<Initials>AZ</Initials>
<Identifier Source="ORCID">0000-0002-5095-5054</Identifier>
<AffiliationInfo><Affiliation>Departamento de Patologia Clínica, Faculdade de Ciências Médicas, Universidade Estadual de Campinas, Campinas, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Santos</LastName>
<ForeName>Magnun N N</ForeName>
<Initials>MNN</Initials>
<AffiliationInfo><Affiliation>Departamento de Patologia Clínica, Faculdade de Ciências Médicas, Universidade Estadual de Campinas, Campinas, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>de Sá</LastName>
<ForeName>Camila Zolini</ForeName>
<Initials>CZ</Initials>
<Identifier Source="ORCID">0000-0002-9394-8807</Identifier>
<AffiliationInfo><Affiliation>Departamento de Genética, Ecologia e Evolução, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Souza</LastName>
<ForeName>Renan P</ForeName>
<Initials>RP</Initials>
<Identifier Source="ORCID">0000-0002-9479-4432</Identifier>
<AffiliationInfo><Affiliation>Departamento de Genética, Ecologia e Evolução, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Resende-Moreira</LastName>
<ForeName>Luciana C</ForeName>
<Initials>LC</Initials>
<Identifier Source="ORCID">0000-0003-2977-8433</Identifier>
<AffiliationInfo><Affiliation>Departamento de Botânica, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Teixeira</LastName>
<ForeName>Mauro M</ForeName>
<Initials>MM</Initials>
<Identifier Source="ORCID">0000-0002-6944-3008</Identifier>
<AffiliationInfo><Affiliation>Departamento de Bioquímica e Imunologia, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Hubner</LastName>
<ForeName>Josy</ForeName>
<Initials>J</Initials>
<Identifier Source="ORCID">0000-0001-6884-6588</Identifier>
<AffiliationInfo><Affiliation>Departamento de Biologia Celular, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Leme</LastName>
<ForeName>Patricia A F</ForeName>
<Initials>PAF</Initials>
<Identifier Source="ORCID">0000-0002-0496-0581</Identifier>
<AffiliationInfo><Affiliation>Centro de Saúde da Comunidade, Universidade Estadual de Campinas, Campinas, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Moreira</LastName>
<ForeName>Rennan G</ForeName>
<Initials>RG</Initials>
<Identifier Source="ORCID">0000-0003-2775-1333</Identifier>
<AffiliationInfo><Affiliation>Centro de Laboratórios Multiusuários, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Nogueira</LastName>
<ForeName>Maurício L</ForeName>
<Initials>ML</Initials>
<Identifier Source="ORCID">0000-0003-1102-2419</Identifier>
<AffiliationInfo><Affiliation>Laboratório de Pesquisas em Virologia, Faculdade de Medicina de São José do Rio Preto, São José do Rio Preto, São Paulo, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><CollectiveName>Brazil-UK Centre for Arbovirus Discovery, Diagnosis, Genomics and Epidemiology (CADDE) Genomic Network</CollectiveName>
</Author>
<Author ValidYN="Y"><LastName>Ferguson</LastName>
<ForeName>Neil M</ForeName>
<Initials>NM</Initials>
<Identifier Source="ORCID">0000-0002-1154-8093</Identifier>
<AffiliationInfo><Affiliation>MRC Centre for Global Infectious Disease Analysis, J-IDEA, Imperial College London, London, UK.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Costa</LastName>
<ForeName>Silvia F</ForeName>
<Initials>SF</Initials>
<Identifier Source="ORCID">0000-0003-1087-752X</Identifier>
<AffiliationInfo><Affiliation>Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</Affiliation>
</AffiliationInfo>
<AffiliationInfo><Affiliation>Departamento de Moléstias Infecciosas e Parasitárias, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Proenca-Modena</LastName>
<ForeName>José Luiz</ForeName>
<Initials>JL</Initials>
<Identifier Source="ORCID">0000-0002-4996-3153</Identifier>
<AffiliationInfo><Affiliation>Departamento de Genética, Evolução, Microbiologia e Imunologia, Instituto de Biologia, Universidade Estadual de Campinas, Campinas, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Vasconcelos</LastName>
<ForeName>Ana Tereza R</ForeName>
<Initials>ATR</Initials>
<Identifier Source="ORCID">0000-0002-4632-2086</Identifier>
<AffiliationInfo><Affiliation>Laboratório de Bioinformática, Laboratório Nacional de Computação Científica, Petrópolis, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Bhatt</LastName>
<ForeName>Samir</ForeName>
<Initials>S</Initials>
<Identifier Source="ORCID">0000-0002-0891-4611</Identifier>
<AffiliationInfo><Affiliation>MRC Centre for Global Infectious Disease Analysis, J-IDEA, Imperial College London, London, UK.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Lemey</LastName>
<ForeName>Philippe</ForeName>
<Initials>P</Initials>
<Identifier Source="ORCID">0000-0003-2826-5353</Identifier>
<AffiliationInfo><Affiliation>Department of Microbiology, Immunology and Transplantation, Rega Institute, KU Leuven, Leuven, Belgium.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Wu</LastName>
<ForeName>Chieh-Hsi</ForeName>
<Initials>CH</Initials>
<Identifier Source="ORCID">0000-0001-9386-725X</Identifier>
<AffiliationInfo><Affiliation>Mathematical Sciences, University of Southampton, Southampton, UK.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Rambaut</LastName>
<ForeName>Andrew</ForeName>
<Initials>A</Initials>
<Identifier Source="ORCID">0000-0003-4337-3707</Identifier>
<AffiliationInfo><Affiliation>Institute of Evolutionary Biology, University of Edinburgh, Edinburgh, UK.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Loman</LastName>
<ForeName>Nick J</ForeName>
<Initials>NJ</Initials>
<Identifier Source="ORCID">0000-0002-9843-8988</Identifier>
<AffiliationInfo><Affiliation>Institute for Microbiology and Infection, University of Birmingham, Birmingham, UK.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Aguiar</LastName>
<ForeName>Renato S</ForeName>
<Initials>RS</Initials>
<Identifier Source="ORCID">0000-0001-5180-3717</Identifier>
<AffiliationInfo><Affiliation>Departamento de Genética, Ecologia e Evolução, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Pybus</LastName>
<ForeName>Oliver G</ForeName>
<Initials>OG</Initials>
<Identifier Source="ORCID">0000-0002-8797-2667</Identifier>
<AffiliationInfo><Affiliation>Department of Zoology, University of Oxford, Oxford, UK.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Sabino</LastName>
<ForeName>Ester C</ForeName>
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<AffiliationInfo><Affiliation>Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil. sabinoec@usp.br nfaria@ic.ac.uk.</Affiliation>
</AffiliationInfo>
<AffiliationInfo><Affiliation>Departamento de Moléstias Infecciosas e Parasitárias, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Faria</LastName>
<ForeName>Nuno Rodrigues</ForeName>
<Initials>NR</Initials>
<Identifier Source="ORCID">0000-0001-8839-2798</Identifier>
<AffiliationInfo><Affiliation>Department of Zoology, University of Oxford, Oxford, UK. sabinoec@usp.br nfaria@ic.ac.uk.</Affiliation>
</AffiliationInfo>
<AffiliationInfo><Affiliation>Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de São Paulo, São Paulo, Brazil.</Affiliation>
</AffiliationInfo>
<AffiliationInfo><Affiliation>MRC Centre for Global Infectious Disease Analysis, J-IDEA, Imperial College London, London, UK.</Affiliation>
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<Agency>Wellcome Trust</Agency>
<Country>United Kingdom</Country>
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<affiliations><list><country><li>Belgique</li>
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<orgName><li>Université d'Oxford</li>
<li>Université d'Édimbourg</li>
<li>Université d'État de Campinas</li>
<li>Université de Birmingham</li>
<li>Université de São Paulo</li>
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<name sortKey="Brady, Oliver J" sort="Brady, Oliver J" uniqKey="Brady O" first="Oliver J" last="Brady">Oliver J. Brady</name>
<name sortKey="Brady, Oliver J" sort="Brady, Oliver J" uniqKey="Brady O" first="Oliver J" last="Brady">Oliver J. Brady</name>
<name sortKey="De Souza Santos, Andreza Aruska" sort="De Souza Santos, Andreza Aruska" uniqKey="De Souza Santos A" first="Andreza Aruska" last="De Souza Santos">Andreza Aruska De Souza Santos</name>
<name sortKey="Du Plessis, Louis" sort="Du Plessis, Louis" uniqKey="Du Plessis L" first="Louis" last="Du Plessis">Louis Du Plessis</name>
<name sortKey="Faria, Nuno Rodrigues" sort="Faria, Nuno Rodrigues" uniqKey="Faria N" first="Nuno Rodrigues" last="Faria">Nuno Rodrigues Faria</name>
<name sortKey="Faria, Nuno Rodrigues" sort="Faria, Nuno Rodrigues" uniqKey="Faria N" first="Nuno Rodrigues" last="Faria">Nuno Rodrigues Faria</name>
<name sortKey="Ferguson, Neil M" sort="Ferguson, Neil M" uniqKey="Ferguson N" first="Neil M" last="Ferguson">Neil M. Ferguson</name>
<name sortKey="Hill, Sarah C" sort="Hill, Sarah C" uniqKey="Hill S" first="Sarah C" last="Hill">Sarah C. Hill</name>
<name sortKey="Hill, Sarah C" sort="Hill, Sarah C" uniqKey="Hill S" first="Sarah C" last="Hill">Sarah C. Hill</name>
<name sortKey="Hoeltgebaum, Henrique H" sort="Hoeltgebaum, Henrique H" uniqKey="Hoeltgebaum H" first="Henrique H" last="Hoeltgebaum">Henrique H. Hoeltgebaum</name>
<name sortKey="Loman, Nick J" sort="Loman, Nick J" uniqKey="Loman N" first="Nick J" last="Loman">Nick J. Loman</name>
<name sortKey="Mellan, Thomas A" sort="Mellan, Thomas A" uniqKey="Mellan T" first="Thomas A" last="Mellan">Thomas A. Mellan</name>
<name sortKey="Mishra, Swapnil" sort="Mishra, Swapnil" uniqKey="Mishra S" first="Swapnil" last="Mishra">Swapnil Mishra</name>
<name sortKey="Nicholls, Samuel M" sort="Nicholls, Samuel M" uniqKey="Nicholls S" first="Samuel M" last="Nicholls">Samuel M. Nicholls</name>
<name sortKey="Pybus, Oliver G" sort="Pybus, Oliver G" uniqKey="Pybus O" first="Oliver G" last="Pybus">Oliver G. Pybus</name>
<name sortKey="Rambaut, Andrew" sort="Rambaut, Andrew" uniqKey="Rambaut A" first="Andrew" last="Rambaut">Andrew Rambaut</name>
<name sortKey="Wu, Chieh Hsi" sort="Wu, Chieh Hsi" uniqKey="Wu C" first="Chieh-Hsi" last="Wu">Chieh-Hsi Wu</name>
</country>
<country name="Brésil"><region name="État de São Paulo"><name sortKey="Candido, Darlan S" sort="Candido, Darlan S" uniqKey="Candido D" first="Darlan S" last="Candido">Darlan S. Candido</name>
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<name sortKey="Aguiar, Renato S" sort="Aguiar, Renato S" uniqKey="Aguiar R" first="Renato S" last="Aguiar">Renato S. Aguiar</name>
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<name sortKey="Braga, Carlos K V" sort="Braga, Carlos K V" uniqKey="Braga C" first="Carlos K V" last="Braga">Carlos K V. Braga</name>
<name sortKey="Buss, Lewis F" sort="Buss, Lewis F" uniqKey="Buss L" first="Lewis F" last="Buss">Lewis F. Buss</name>
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<name sortKey="Coletti, Thais M" sort="Coletti, Thais M" uniqKey="Coletti T" first="Thaís M" last="Coletti">Thaís M. Coletti</name>
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<name sortKey="De Jesus, Jaqueline G" sort="De Jesus, Jaqueline G" uniqKey="De Jesus J" first="Jaqueline G" last="De Jesus">Jaqueline G. De Jesus</name>
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